DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and Fife

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001261340.1 Gene:Fife / 38337 FlyBaseID:FBgn0264606 Length:1314 Species:Drosophila melanogaster


Alignment Length:655 Identity:114/655 - (17%)
Similarity:180/655 - (27%) Gaps:278/655 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LPRP----TGPPLDESEKPAAEQKLNRLKTEAENKRIKIKNLKSA---------LEKLDITDNID 164
            :|.|    |||.|::.|.|..:..:     :.|..||.|.::.|.         :.:.|.||.  
  Fly   445 IPPPMASFTGPNLEDLEAPRRQTSM-----DGEAIRIVIHDVDSGPICASKRRIILRRDPTDK-- 502

  Fly   165 IRIRQAELEYALGREELQMLSIVEEARALQARLEKSKPEAQTLYNIISSGVSLSLHAVHATSGRW 229
                                  ....|....|:...|           :|....|.|        
  Fly   503 ----------------------AHRTRGFGMRVVGGK-----------TGADGRLFA-------- 526

  Fly   230 AVQQRTDQPGFYVEW-----ALEGDGLYKGDRILEINGRLVTGKSKEEL---------------- 273
                       |:.|     |.|.:||.:||:|||.||..:..:|.||:                
  Fly   527 -----------YIVWTVPGGAAEKNGLQQGDKILEWNGMSLIDRSFEEVCSIMDRTGDVVELLVE 580

  Fly   274 -------------QKQVGNSG--------------------------KCQMVVLRKKSVPIPQKQ 299
                         ....||:|                          |......|:| :|...:|
  Fly   581 HATDFRMCDLFDENLPPGNAGGQSGPRRSGDGPVGLGLIAEPETTTDKSPASPTRRK-LPKTPEQ 644

  Fly   300 LDQEKENNMRLQHRISYLEEQ---VRELQTVKEHHPSQQQ----------------------QQQ 339
            :.:||....|:|.::.|..|:   |..|....:..|..:.                      ..|
  Fly   645 IAREKLVTGRVQIQVWYHAERSELVVSLMAGDDLAPRDEAYGHGNLPEAYAKVRILPKCGDGSVQ 709

  Fly   340 QQQQQNPQQNPQQNPQQTSSN-------------------------------------------- 360
            |.:...|.|||..|...|..:                                            
  Fly   710 QTEVSRPTQNPIWNATLTFGHVKADTLMVRYIDIQLWDLVPHTESIFLGECSIELQQAFLDDQAI 774

  Fly   361 -----QSQHVTSISISSPPSTPPEKPLIFQRGNYITTLVGGKPIELMGDDMASTQTPPGHVTKTL 420
                 .::.:..||||..||..|.                       |...|....|.|.||:.|
  Fly   775 WCRLEDTKGLRGISISKSPSVSPR-----------------------GSIAAGAGAPSGDVTRLL 816

  Fly   421 IKENTHIDLRDRLSHMYSMP-SKSLSASKIS-----INSDSAYMQHHRRDKERHRDRQ------- 472
            .::             |:|. |.|.....|.     ::.|.|::...||...:....:       
  Fly   817 RRD-------------YNMQRSNSDDVDSIGDGTSLLHPDHAWIAGSRRGSSQSETMEVEVYQLG 868

  Fly   473 ---HRERP---RDPLQQQQQLH-REHLMSTHARSVEHLNHYNGLDRRRDTPRQSESNTLRA--RL 528
               .|..|   |...|..::.. .|..|:|...|      |....||....|:.....|::  .:
  Fly   869 KDFSRSLPGSRRSSFQDAEKNRLEEDAMATPPTS------YLVGRRRSSVARRDPDEILKSLKAV 927

  Fly   529 PSDMRSVKSLDFDSENESKPATETRTTRPTPP--KKPLRLSL-----QRAQSLQTVELHPCADIE 586
            ..::....||..:..........:|...|:.|  :|...|.|     |:.|.||.::|.....::
  Fly   928 RGELGRTMSLGTEQHKRMGSRRASRVGLPSGPSSRKSSVLDLSQQHQQQLQQLQQLQLQQQQYLQ 992

  Fly   587 RKRPM 591
            ::.||
  Fly   993 QQLPM 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 17/95 (18%)
FifeNP_001261340.1 FYVE_BSN_PCLO 130..187 CDD:277290
PDZ_signaling 491..580 CDD:238492 25/142 (18%)
DegQ <526..577 CDD:223343 17/69 (25%)
C2A_RIM1alpha 651..779 CDD:175997 15/127 (12%)
C2 1163..1304 CDD:301316
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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