DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and pdzk1

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001122142.2 Gene:pdzk1 / 337325 ZFINID:ZDB-GENE-031222-1 Length:553 Species:Danio rerio


Alignment Length:535 Identity:98/535 - (18%)
Similarity:171/535 - (31%) Gaps:185/535 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LGKLPRPTGPPLDESEKPAAEQKLNRLKTEAENKRIKIKNLKSA--LEKLD-----ITDNIDIRI 167
            |..||..:.|.::....|||:.||..|:..:......:|:.|.|  :..:|     :.|...:::
Zfish   104 LQSLPGQSQPTMNGVSTPAAKAKLCYLQKSSSGFGFSLKSTKGAHGIFMVDVVSGGVADQAGVKL 168

  Fly   168 RQAELEYALGREELQML---SIVEEARALQARLE------------KSKPEAQTLYNIISSGVSL 217
            ....:|  :..|.::.|   .||::.:|...||.            |||.        |..||| 
Zfish   169 GDRLVE--INSENVEHLVHDQIVQKVKAASDRLMLLLVDEEADRYFKSKN--------IQPGVS- 222

  Fly   218 SLHAVHAT------SGRWA-VQQRTDQPGFYVEWALEGDGLYKG--------------------D 255
                 |||      ..|.| :.:|.|..||    .|:.|...||                    |
Zfish   223 -----HATVKHLPHKPRIADMIKRADGYGF----MLKEDPKRKGHCIGEIDKGSPAERAGMKDMD 278

  Fly   256 RILEINGRLVTGKSKEELQKQVGNSGKCQMVVLRKKSVPIPQKQLDQEKENNMRL--QHRISYLE 318
            |:..:||..:.....|::.:::....||.::|            ||.|.:...:|  ...:.|.|
Zfish   279 RLAAVNGEDIENCKHEQVVEKICQGNKCCLLV------------LDAETDKIYKLGGVSPLLYWE 331

  Fly   319 EQVRELQTVKEHHPSQQQQQQQQQQQNPQQNPQQNPQQTSSNQSQHVTSISISSPPSTPPEKPLI 383
            |....|....:                              |::..:.:::.:.|          
Zfish   332 EMRGSLPGYPD------------------------------NEAVAIPAVAAAVP---------- 356

  Fly   384 FQRGNYITTLVGGKPIELMGDDMASTQTP------PG---HVTKTLIKENTHIDLRDRLSHMYSM 439
                   ..:|...|........|:|.||      |.   |..|....|.|.......|:.:..:
Zfish   357 -------AAVVAATPAPAATPAPAATPTPVPAAAEPADVDHKPKLCRLERTSAGFGFHLNGIQGV 414

  Fly   440 PSKSL-------SASK---------ISINSDSAYMQHHRR-----------------DKERHRDR 471
            |.:.:       :|.:         :.::..:..|..|..                 |::.:...
Zfish   415 PGQHIQEVVKGGAADRAGLVDDDVVVEVDGVNVEMSTHEEVVNLIRNSGDTLVLLVADRKAYEHL 479

  Fly   472 QHRERPRDPLQQQQQLHREHLMSTHARSVEHLNHYNGLDRRRDTPRQSESNTLRARLPSDMRSVK 536
            :.:..|..|    |.|::|......|.:      |..:|.|:||.:..|.   .|..|:..||..
Zfish   480 KAKGIPITP----QLLNKEPAADVPAPA------YTQVDGRKDTEKDIEK---PATPPAPTRSRS 531

  Fly   537 SLDFDSENESKPATE 551
            |....|.:.|..|::
Zfish   532 SSSSSSSSSSSSASD 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 10/60 (17%)
pdzk1NP_001122142.2 PDZ_signaling 6..86 CDD:238492
PDZ_signaling 126..204 CDD:238492 16/79 (20%)
PDZ 232..311 CDD:214570 18/94 (19%)
PDZ_signaling 392..471 CDD:238492 8/78 (10%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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