DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and CG5921

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster


Alignment Length:616 Identity:110/616 - (17%)
Similarity:208/616 - (33%) Gaps:194/616 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDTGSVVSEPISAHHRAFAKQKSASMTILNPKGCGSAVKYSLHSTAETNQETASTTTTSTHCSTT 65
            |.|.:..|..||.         |||:|......|.|:::.|..|:|.::..|.:||..|:.|:..
  Fly     1 MMTMTAASASIST---------SASLTNSASTDCSSSMQGSTTSSASSDVMTLTTTAASSWCAIP 56

  Fly    66 GRRRKGGSLGGTLSSRSTRSESKELRSALQDREAVIQNLRIQLCLGKLPRPTGPPLDESEKPAAE 130
            .            |||     .:.||        :::..:.:|.:|...|  |.....:.:...|
  Fly    57 A------------SSR-----LRVLR--------LVRPHQRRLLVGGPER--GSTYGFTVRGGRE 94

  Fly   131 QKLNRLKTEAENKRIKIKNLKSALEKLDITDNIDIRIRQAELEYALGREELQMLS----IVEEAR 191
            .......:..|:      ..::.|:.|.|.|.| :||....|:.|:.:|.:|:::    :..:.|
  Fly    95 HGTGFFVSHVEH------GGEAHLKGLRIGDQI-LRINGFRLDDAVHKEFIQLVAGQDRVTLKVR 152

  Fly   192 ALQARLEKSKPEAQTLYNII---------------------SSGVSLSLHAVHAT--------SG 227
            .:.....:..||.:..::::                     |..:|:.||....|        ..
  Fly   153 GVGMLPVRDLPEERLSWSVVKLPSVSGTPSESSFKGERRGASRDISVVLHVAPRTKLGLGICKGP 217

  Fly   228 RWAVQQRTDQPGFYVEWALEGD-----GLYKGDRILEING----------RLVTGKSKEELQKQV 277
            .|       :||.:|::..:..     ||..||:||.:|.          .:...||..:|...|
  Fly   218 EW-------KPGIFVQFTKDRSVAREAGLRPGDQILSVNSIDFSDVLFSEAVAVMKSSSKLDMVV 275

  Fly   278 GNSGKC-------------------------------QMVVLRKKS------------------- 292
            ..:..|                               ::..:|::|                   
  Fly   276 RTAAGCDLFPGESSGYNSSASSVTGDQSPCWADAKSKRLTAVREESGAGGGGCGLSSAPGAGSPN 340

  Fly   293 ----VPIPQKQLDQE----KENNMRLQHRISYLEEQVRELQTVKEHHPSQQQQQQQQQQQNPQQN 349
                |.: .||:::.    .||...:.:  :|:........:......|....:.||.|.|| .|
  Fly   341 WSQGVEV-HKQMNKTIIKLTENGTSINN--TYIASTGGSSVSGSGSTGSGTSGRSQQSQSNP-SN 401

  Fly   350 PQQNPQQTSSNQSQHVTS----ISISSPPSTPPEKPLIFQRGNYITTLVGGKPIELMGDDMASTQ 410
            |.:|......:..:.|.|    |.:||..:.        ..|:..::..|.:    .|..:|...
  Fly   402 PSRNSTTMKRSHLRPVNSAGSGIGLSSGSAG--------SAGSAGSSGSGSR----SGGVIAPAP 454

  Fly   411 TPPGHVTKTLIKENTHIDLRDRLSHMYSMPSKSLSASKISINSDSAYMQHHRRDKERHRDRQHRE 475
            .||    ...:.|..:             .|.|:.:|..|..::....:..::.:::|:.|.:|:
  Fly   455 APP----PPAMNEGAN-------------ASGSVGSSLSSAITEELKKRKEKQQQQQHQQRHNRD 502

  Fly   476 RPRDPL-QQQQQLHREHLMSTHARSVEHLNH 505
            |.||.. ...:||...:....|..||..::|
  Fly   503 RDRDGNGNVDRQLTGHNGNGGHRSSVGQVSH 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 12/86 (14%)
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 14/76 (18%)
PDZ_signaling 197..276 CDD:238492 18/85 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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