DRSC/TRiP Functional Genomics Resources

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Protein Alignment sprt and PsGEF

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_996333.4 Gene:PsGEF / 31224 FlyBaseID:FBgn0264598 Length:2777 Species:Drosophila melanogaster


Alignment Length:677 Identity:129/677 - (19%)
Similarity:217/677 - (32%) Gaps:269/677 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 TTTSTH------CSTTGRRRKGGSLGGTLSSRSTRSESKELRSALQDREAVIQNLRIQLCLGKLP 114
            |.||||      ||:.|        |||.::.:..:.:|      |.|:|:|:|:....|     
  Fly  1762 TKTSTHVWDNSGCSSNG--------GGTSTTSTATTTTK------QPRQAIIENIPEDSC----- 1807

  Fly   115 RPTGPPLDESEKP--AAEQKLNRLKTEAENKRIKIKNLKSALEKLDITDNIDIRIRQAELEYALG 177
              ...|||| |.|  .....|.|..|            .|:||||...|.:|             
  Fly  1808 --DESPLDE-EPPYRPMSSALRRFGT------------MSSLEKLPSDDRMD------------- 1844

  Fly   178 REELQMLSIVEEARALQARLEKSKP-------------------EAQTLYNII----SSGVSLSL 219
                       ||..|...|:..||                   |...:.|.:    ||||.::.
  Fly  1845 -----------EADELDDDLDSFKPNGHDGNSPQNEEDDEDADSERALVQNDLGASSSSGVIVNG 1898

  Fly   220 HAVHATSGRWAVQQRTDQPGFYV-------------------EW-------------ALEGD--- 249
            ..:  .||.|     |::.|.||                   .|             |.|.|   
  Fly  1899 EGL--ASGAW-----TNRAGAYVSDKMSFFEESRAFIDKYLGRWNAGDAQQQHQQGTASETDEQM 1956

  Fly   250 -----GLYKGDRILEINGRLVTGKSKEELQKQVGNSGKC----------------------QMVV 287
                 |...|:   |:.|...:|...::...|:.||...                      ::::
  Fly  1957 DECTSGATSGE---EVWGTPTSGGDNDDQDLQLINSENTHSSPTKSSTSLNDDDDTELMMDELLM 2018

  Fly   288 ----------------LRKKSVPIPQKQLDQEKENNMRLQHRIS---------YLEEQV------ 321
                            .|::..|:.:::.:.::|...:....|.         |||:..      
  Fly  2019 APPMTASTIRGLLPRFYRRRLEPLFEEETESDEEKTQQDSDDIKKGEATTNGHYLEDSAGSSSDS 2083

  Fly   322 -----------RELQTVKEHHPSQQQQQQQQQQQNPQQNPQQNPQQ------TSSNQSQHVTSIS 369
                       |.:...:|..||.:.||:....:: |::...:.::      ||:...:.:.:..
  Fly  2084 ESVPPAPPLVPRPVVPDREEDPSAEGQQENLAMED-QEDLHSSVERLLPNLATSAMGPRPLLTTR 2147

  Fly   370 ISSPPSTPPEKP--LIFQRGNYITTLVGGKPIELMGDDMA-----------STQTP--PGHVTKT 419
            :....:..|:.|  |:.....|   |:..:|..:.|.|:|           |..||  |.....|
  Fly  2148 LLPTTAIDPQPPAVLVASSCEY---LLDQRPSSVPGRDLAGGSIGTTTMTSSRPTPLSPAKAAAT 2209

  Fly   420 LIKENTHIDLRDRLSHMYSMPSKSLSA--SKISINSDSAYMQHHRRDKERHRDRQHRERPRDPLQ 482
            .|..|..:..:...:.|.: ||::.|:  |.||..||:.      ....|...|..|..|..|..
  Fly  2210 PIGMNATMTTKTTTTTMMT-PSRAPSSTISTISSASDTT------SSGGRASGRPPRFVPPPPPP 2267

  Fly   483 QQQQLHREHLMSTHARSVEHLNHYNGLDRRRDTPRQSESNTLRARLPSDMRSVKSLDFDSENESK 547
            ::..|.:..|::..|::              :.||:....|      :|.....::. |:.:.|.
  Fly  2268 RRLLLTQTDLIAGQAKT--------------ELPRKKSGAT------ADSGCSVAVG-DAASASD 2311

  Fly   548 P-ATETRTTRPTP----------PKKP 563
            | |..:||...||          ||:|
  Fly  2312 PTAIGSRTMPSTPSTSSLASAVAPKRP 2338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 10/86 (12%)
PsGEFNP_996333.4 DUF4799 <102..209 CDD:292674
C2 286..>381 CDD:278593
PDZ_signaling 644..716 CDD:238492
RhoGEF 831..1000 CDD:295373
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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