DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and Mpdz

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_006238402.1 Gene:Mpdz / 29365 RGDID:3105 Length:2068 Species:Rattus norvegicus


Alignment Length:407 Identity:81/407 - (19%)
Similarity:143/407 - (35%) Gaps:101/407 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DTGSVVSEPIS--AHHRAFAKQKSAS---MTI-LNPKGCGSAVKYSLHSTAETNQETASTTTTST 60
            |..||..:.:|  |..|.....|.:|   ||: .|..|.|..|:..:|..|              
  Rat   978 DAESVTLQSMSQEAFERTVTIAKGSSSLGMTVSANKDGLGVIVRSIIHGGA-------------- 1028

  Fly    61 HCSTTGRRRKGGSLGGTLSSRSTRSESKELRSALQDREAVIQNLRIQLCLGKLPRPTGPPLDESE 125
             .|..||...|..: .:::..||.|.:.....|:..|.::|                ||.:..|.
  Rat  1029 -ISRDGRIAVGDCI-LSINEESTISLTNAQARAMLRRHSLI----------------GPDIKFSA 1075

  Fly   126 KPAAEQK----LNRLKTE-AENKRIKIKNLKSALEKLDITDNIDIRIRQAELEYALGREELQMLS 185
            .||.::.    :..:..| .|..|:........:..|||..:.            .|| ::..|.
  Rat  1076 APADDRAPFYVITYVPAEHLEEFRVSFGQQAGGIMALDIFSSY------------TGR-DIPELP 1127

  Fly   186 IVEEARALQARLEK------SKPEAQTLYNIISSGVSLSLHAVHATSGRWAVQQRTD---QPGFY 241
            ..||....::.|:.      |:|....|:...|..:.:|:     ..||....:.::   ..|.:
  Rat  1128 EREEGEGEESELQNAAYSSWSQPRRVELWREPSKSLGISI-----VGGRGMGSRLSNGEVMRGIF 1187

  Fly   242 VEWALEG-----DGLYK-GDRILEINGRLVTGKSKEELQKQVGNSGK-----CQMVVLRKKSVPI 295
            ::..||.     :|..| ||||:|::|..:...|.|:..:.:..:|.     .|.:|.|.:..|:
  Rat  1188 IKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGSPVVFMVQSIVNRPRKSPL 1252

  Fly   296 PQKQLDQEKENNMRLQHRI------SYLEEQVRELQTVKEHHPSQQQQQQQQQQ--QNPQQNPQQ 352
            |.            |.|.:      |........||...:..|||.:.:.::..  ..|..:|..
  Rat  1253 PS------------LPHSLYPKCSFSSTNPFAESLQLTSDKAPSQSESESEKATLCSVPSSSPSV 1305

  Fly   353 NPQQTSSNQSQHVTSIS 369
            ..:.:|.......|:::
  Rat  1306 FSEMSSDYAQPSATTVA 1322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 13/51 (25%)
MpdzXP_006238402.1 L27_2 6..63 CDD:117611
PDZ_signaling 140..222 CDD:238492
PDZ_signaling 256..335 CDD:238492
PDZ 374..463 CDD:214570
PDZ_signaling 552..621 CDD:238492
PDZ_signaling 693..776 CDD:238492
PDZ_signaling 993..1063 CDD:238492 19/85 (22%)
PDZ_signaling 1150..1241 CDD:238492 20/95 (21%)
PDZ 1348..1433 CDD:214570
PDZ_signaling 1482..1561 CDD:238492
MPDZ_u10 1563..1624 CDD:293272
PDZ 1625..1709 CDD:214570
PDZ_signaling 1721..1801 CDD:238492
PDZ_signaling 1858..1943 CDD:238492
PDZ_signaling 1984..2067 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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