DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and PDZD2

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_005248326.1 Gene:PDZD2 / 23037 HGNCID:18486 Length:2873 Species:Homo sapiens


Alignment Length:521 Identity:103/521 - (19%)
Similarity:178/521 - (34%) Gaps:165/521 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KYSLHSTAETNQETAS------TTTTSTHCSTTGRR-RKGGSLGGTLSSRSTRSESK-----ELR 91
            |:..|||...|...:|      |.......:..|:| ||.|.:....::::. .|||     |:.
Human   180 KHKAHSTYNGNSSNSSEPGETPTLELGDRTAKKGKRTRKFGVISRPPANKAP-EESKGSAGCEVS 243

  Fly    92 SALQDREAVIQN-----------LRIQLCLGKLPRPTGPPLDESEKPAAEQ----KLNRLKTEAE 141
            |   |....::|           .:::.....|....||.|:.||.....:    |.:...|.:.
Human   244 S---DPSTELENGPDPELGNGHVFQLENGPDSLKEVAGPHLERSEVDRGTEHRIPKTDAPLTTSN 305

  Fly   142 NKRIKIKNLKSALEKLDITDNIDIRIRQAELEYALGREE---LQMLSIVEEARALQARLEKSKPE 203
            :||...|..|:..:..|                .|.|||   :..:.:::|:..|..::...:  
Human   306 DKRRFSKGGKTDFQSSD----------------CLAREEVGRIWKMELLKESDGLGIQVSGGR-- 352

  Fly   204 AQTLYNIISSGVSLSLHAVHATSGRWAVQQRTDQPGFYVEWALEGDG-LYKGDRILEINGRLVTG 267
                      |...|.||:..|        :..:.|     |...|| |..||.:|.|||.|:.|
Human   353 ----------GSKRSPHAIVVT--------QVKEGG-----AAHRDGRLSLGDELLVINGHLLVG 394

  Fly   268 KSKEELQKQVGN-SGKCQMVV------------LRKKSVPIPQKQL----------DQEKE---- 305
            .|.||....:.: :|..|:||            |..||:|.....:          |||.:    
Human   395 LSHEEAVAILRSATGMVQLVVASKENSAEDLLRLTSKSLPDLTSSVEDVSSWTDNEDQEADGEED 459

  Fly   306 -------------------------------------NNMRLQHRISYLEEQVRELQTVKEHHP- 332
                                                 |.::|:.|:|   ..|..|::|:|::. 
Human   460 EGTSSSVQRAMPGTDEPQDVCGAEESKGNLESPKQGSNKIKLKSRLS---GGVHRLESVEEYNEL 521

  Fly   333 -----SQQQQQQQQQQQNPQQNPQQNPQQTSSNQSQHVTSISISSPPSTPPEKPLIFQRGNYITT 392
                 ..:.:..:..:...:.:..|....:|::|..|:...|..|..:|..|.|....|.:.| :
Human   522 MVRNGDPRIRMLEVSRDGRKHSLPQLLDSSSASQEYHIVKKSTRSLSTTQVESPWRLIRPSVI-S 585

  Fly   393 LVG-----GKPIELM---GDDMASTQTPPGHVTKTLI-----KENTHIDLRDRLSHMYSMPSKSL 444
            ::|     ||.:...   |.|....|.  |...||:.     .|:..:...|.:..:..:|.|.|
Human   586 IIGLYKEKGKGLGFSIAGGRDCIRGQM--GIFVKTIFPNGSAAEDGRLKEGDEILDVNGIPIKGL 648

  Fly   445 S 445
            :
Human   649 T 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 18/54 (33%)
PDZD2XP_005248326.1 PDZ_signaling 335..416 CDD:238492 26/105 (25%)
PDZ_signaling 589..670 CDD:238492 13/63 (21%)
PDZ_signaling 726..810 CDD:238492
PDZ_signaling 2623..2694 CDD:238492
PDZ 2785..2867 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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