DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and txt-1

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_493661.1 Gene:txt-1 / 183651 WormBaseID:WBGene00016807 Length:152 Species:Caenorhabditis elegans


Alignment Length:72 Identity:18/72 - (25%)
Similarity:42/72 - (58%) Gaps:6/72 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 GLYK-GDRILEINGRLVTGK--SKEELQKQVGNSGKCQMVVLRKK---SVPIPQKQLDQEKENNM 308
            |:.| ||:|:|||.:.|..|  .|:.|.:.:.:.|:..::::|.|   :|.:.::::...::.:.
 Worm    81 GVLKYGDQIIEINKKNVLNKIDCKKRLMQCLKDKGQVDIIIVRPKTADAVTMIEQEIQLSQQPST 145

  Fly   309 RLQHRIS 315
            ..|.:|:
 Worm   146 TAQPKIN 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 13/40 (33%)
txt-1NP_493661.1 PDZ_signaling 45..>100 CDD:238492 9/18 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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