DRSC/TRiP Functional Genomics Resources

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Protein Alignment sprt and mics-1

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001343863.1 Gene:mics-1 / 179475 WormBaseID:WBGene00011890 Length:293 Species:Caenorhabditis elegans


Alignment Length:233 Identity:45/233 - (19%)
Similarity:69/233 - (29%) Gaps:89/233 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 EKSKP-EAQTLYNIISSGVSLSLHAVHATSGRWAVQQRTDQPGFYVEWALEGD-GLY-------- 252
            ::|.| ||.|:..|..:......:.|..          ||.|.|.      || |:|        
 Worm    63 QESVPLEALTVVEIEKTSKGFGFNIVGG----------TDNPHFV------GDIGIYVSSVNSES 111

  Fly   253 -------KGDRILEINGRLVTGKSKEELQK-----QVGNSGKCQMVVLRKKSVPIPQKQLDQEKE 305
                   .||:||..:|..:|.|:.:|..:     ::|:..|                       
 Worm   112 KSYGVVRTGDKILSFDGIDMTYKTHDEAVEVFRSVKIGHVAK----------------------- 153

  Fly   306 NNMRLQHRISYLEEQVRELQTVKEHHPSQQQQQQQQQQQNPQQNPQQNPQQTSSNQSQHVTSISI 370
              |.:.....:|:|...:..|.......|...|.:..|.|.......:..::.|..:.|..|..|
 Worm   154 --MLIDREYLHLQEDRTQTPTASVSITPQVTPQTRSTQNNTDTPKSMSHSESKSRLTSHGLSAVI 216

  Fly   371 -----------------SSPPST---------PPEKPL 382
                             |..|||         .|.|||
 Worm   217 ERIRGKVYEEEDAQSVTSYAPSTHSIIDDVPRTPRKPL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 14/61 (23%)
mics-1NP_001343863.1 PDZ_signaling 71..145 CDD:238492 19/89 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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