DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and Mpdz

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001292213.1 Gene:Mpdz / 17475 MGIID:1343489 Length:2069 Species:Mus musculus


Alignment Length:686 Identity:141/686 - (20%)
Similarity:234/686 - (34%) Gaps:189/686 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 CGSAVKYSLHSTA--ETNQETASTTTTSTHCSTTGRRRKGGSLGGTLSSRSTRSESKELRSALQD 96
            ||:.||..:...|  ||...::...|.|:..|:|...|...|     :.::..||:.::..... 
Mouse   326 CGNRVKLMIARGAVEETPASSSLGITLSSSTSSTSEMRVDAS-----TQKNDESETFDVELTKN- 384

  Fly    97 REAVIQNLRIQLC--LG-KLPRPTGPPLDESEKPAA--------------------------EQK 132
                :|.|.|.:.  :| |...|:|..:....|.:|                          :|.
Mouse   385 ----VQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQA 445

  Fly   133 LNRLKTEAENKRIKIKNLKSALEKLDITD------NIDIRIRQAEL-EYALG-REELQMLSIVEE 189
            :..|:...:..|:.:.. |.|.::.::|.      ::|:.....|. |.:|. :....:|.|.||
Mouse   446 VEVLRHTGQTVRLTLMR-KGASQEAELTSRGDTAKDVDLPAENCEKDEESLSLKRNTSILPIEEE 509

  Fly   190 A-RALQARLEKS---KPEAQTL----------YNII---------SSGVSLSLHAVHATSGRWAV 231
            . ..|.|.||::   :.||..|          |.|:         :||:.:||   .||.|...:
Mouse   510 GFPLLSAELEEAEDVQQEAALLTKWQRIMGINYEIVVAHVSKFSENSGLGISL---EATVGHHFI 571

  Fly   232 QQRTDQPGFYVEWALEGDG-LYKGDRILEINGRLVTGKSKEELQKQVGNSGK-----CQMVVLRK 290
              |:..|    |..:...| |:.||.:||:||..:.|::.::    |.|..|     ..||..|:
Mouse   572 --RSVLP----EGPVGHSGKLFSGDELLEVNGINLLGENHQD----VVNILKELPIDVTMVCCRR 626

  Fly   291 KSVPIPQKQLDQEKENNMRLQHRISY-LEEQVRELQTVKEHHPSQQQQQQQQQQQNPQQNPQQNP 354
            ...||...::|....|::.|..:... |.|.:...:|...........|..::.|.|....:...
Mouse   627 TVPPIALSEMDSLDINDLELTEKPHIDLGEFIGSSETEDPMLAMSDVDQNAEEIQTPLAMWEAGG 691

  Fly   355 QQTSSNQSQHVTSISI--SSPPSTPPEKPLIFQRGNYITTLVGGKPIE-----LMGDDM------ 406
            |.....:.......||  ...|..|....::      |.:||.|...|     ..||.:      
Mouse   692 QSIELEKGSRGLGFSILDYQDPIDPANTVIV------IRSLVPGGIAEKDGRLFPGDRLMFVNDI 750

  Fly   407 ------------ASTQTPPG----HVTKTL----------IKENTHI---------DLRDR---- 432
                        |....|.|    .|.|.|          .||:..:         .|.|:    
Mouse   751 NLENSTLEEAVEALKGAPSGMVRIGVAKPLPLSPEEGYVSAKEDAFLCSPHACKESGLSDKALFR 815

  Fly   433 --LSHMYSMPSKSLSASK----ISINSDSAYMQHHR---------RDKERHRDRQHRERPRDPLQ 482
              |:.:.:..::|::.|:    .|.::||.|.....         .|...:........|:|...
Mouse   816 ADLALIDTPDAESIAESRFESQFSPDNDSVYSTQASIFSLHDGTCSDGMNYGPSLPSSPPKDVTS 880

  Fly   483 QQQQLHREHLMSTHARSVEHLNHYNGLDRRR-DTPRQSESNTLRARLPSDMRSVKSLDFD-SENE 545
            ..:.:...||      |:|.|...|.|.|:. .:|            |:|||...:..|. |:..
Mouse   881 SSEVVLGLHL------SLEELYTQNLLQRQHAGSP------------PTDMRPAPTSGFPISDYT 927

  Fly   546 SKPATETRTTRPTPPKKPLRLSLQRAQSLQTVELHP 581
            :..|.|.:.....|...|   ..|...||.|.||.|
Mouse   928 TTNAVEQKYECANPVAWP---HSQLPSSLSTSELAP 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 14/46 (30%)
MpdzNP_001292213.1 L27_2 6..63 CDD:117611
PDZ_signaling 140..222 CDD:238492
PDZ_signaling 256..335 CDD:238492 4/8 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..372 6/28 (21%)
PDZ 375..464 CDD:214570 13/94 (14%)
PDZ_signaling 553..622 CDD:238492 22/81 (27%)
PDZ_signaling 694..777 CDD:238492 14/88 (16%)
PDZ_signaling 994..1064 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1125..1144
PDZ_signaling 1151..1242 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1278..1313
PDZ 1349..1434 CDD:214570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1449..1473
PDZ_signaling 1483..1563 CDD:238492
MPDZ_u10 1564..1625 CDD:293272
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1571..1611
PDZ 1626..1710 CDD:214570
PDZ_signaling 1722..1802 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1809..1848
PDZ_signaling 1859..1944 CDD:238492
PDZ_signaling 1985..2068 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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