DRSC/TRiP Functional Genomics Resources

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Protein Alignment sprt and gras-1

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_492164.1 Gene:gras-1 / 172549 WormBaseID:WBGene00009272 Length:245 Species:Caenorhabditis elegans


Alignment Length:223 Identity:46/223 - (20%)
Similarity:97/223 - (43%) Gaps:49/223 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 QARLEKSKPEAQTLYNIISSGVS--------LSLHAVHATSGRWAVQ----QRTDQPGF----YV 242
            :.||.....|...|.:.:..|::        |.......||..:|:|    :||....:    ||
 Worm    28 EQRLLCDAKEEYPLNDYLFDGINQESAQRSLLLCRQTFETSFGFALQSYVFKRTSSNSYERITYV 92

  Fly   243 EWALEGD------GLYKGDRILEINGRLVTGKSKEELQKQVGNSGKCQMVVLRKKSVPIPQKQLD 301
            :: :..|      |:.:||.::.:|.:.|...|..|:.:.:   .:|..|     |:.:..|.:.
 Worm    93 DY-VSADSPADRCGITRGDMVIAVNEKSVVTASHAEIVESI---AQCLQV-----SLVLVFKDVA 148

  Fly   302 QEKENNMR-LQHRISYLEEQVRELQTVK-----------EHHPSQQQQQQQQQ---QQNPQQNPQ 351
            :..|.:|| :|.|. .|:.::|||:.::           :.|.::::.:..:.   :.:.:....
 Worm   149 RIVELSMRSIQLRF-MLDAKIRELRMLEKTEEDLQALYDDEHGNEEEDESLESTLYELDEELKNV 212

  Fly   352 QNPQQTSSNQS--QHVTSISISSPPSTP 377
            ||||:..:|.:  :|:..|:.|:...||
 Worm   213 QNPQEKEANGTDYRHLIRINSSTSVGTP 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 10/46 (22%)
gras-1NP_492164.1 PDZ 67..145 CDD:238080 19/86 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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