DRSC/TRiP Functional Genomics Resources

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Protein Alignment sprt and Grip2

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_612544.2 Gene:Grip2 / 171571 RGDID:621668 Length:1043 Species:Rattus norvegicus


Alignment Length:571 Identity:117/571 - (20%)
Similarity:198/571 - (34%) Gaps:122/571 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SLGGTLSSRSTRSESKE-LRSALQDREAVIQNLRIQLCLG------------KLPRPTGPPLDES 124
            ::.|..:...|..|:.: ||.|...|:.|   |.|:..:.            |||:..|..|..:
  Rat   512 AINGIATEDGTMEEANQLLRDAALARKVV---LEIEFDVAESVIPSSGTFHVKLPKRRGVELGIT 573

  Fly   125 EKPAAEQKLNRLKTEAENKRIKIKNLKSALE---KLDITDNIDIRIRQAELEYALGREELQMLSI 186
            ...|:.::...| ..::.|:..:.:....||   ||...||  ||:....:|||     :|:|..
  Rat   574 ISSASRKRGEPL-IISDIKKGSVAHRTGTLEPGDKLLAIDN--IRLDHCPMEYA-----VQILRQ 630

  Fly   187 VEEARALQARLEKSKPEAQTLYNIISSGVSLSLHAVHATSGRWAVQ-QRTDQP-------GFYVE 243
            .|:...|:.|.::...:.|.....:|..|.|..:     .|...:. ..|::|       |....
  Rat   631 CEDLVKLKIRKDEDNSDEQESSGAVSYTVELKRY-----GGPLGITISGTEEPFDPIIISGLTKR 690

  Fly   244 WALEGDG-LYKGDRILEINGRLVTGKSKEELQKQVGNSGKCQMVVLRKK-SVPIPQKQ------- 299
            ...|..| ::.|||||.||...:.|:...|....:..:|:...:.::|: ..|:..:|       
  Rat   691 GLAERTGAIHVGDRILAINSVSLKGRPLSEAIHLLQVAGETVTLKIKKQLDRPLLPRQSGSLSEA 755

  Fly   300 --LDQEKENNMRLQHRISYLEEQVRELQTVKEHHPSQQQQQ--QQQQQQNPQQNPQQ-NPQQTSS 359
              :|::....::.....::....|..:.:..|...|...:.  .......||...:. .||:..|
  Rat   756 SDVDEDPPEALKGGLLTTHFSPAVPSVDSAVESWGSSATEGGFGGSGSYTPQVAVRSVTPQEWRS 820

  Fly   360 NQSQHVTSISISSPPSTPPEKPLIFQRGNYITTLVGGK-----PIELMGDDMASTQTPPGHVTKT 419
            ::.:       ||||...|.:          |:...|.     |.|..||........||...:.
  Rat   821 SRLK-------SSPPPLEPRR----------TSYTPGPTDESFPEEEEGDWEPPMSPAPGPAREE 868

  Fly   420 LIKENTHIDLRDRLSHMYSMPSKSLSASKISINSDSAYMQHHRRDKERHRDRQHRERPRD----- 479
            .........|.|..|...|...:.|.||.::....|..:......:...|.|:....|.|     
  Rat   869 GFWRVLGEALEDLESCGQSELLRELEASIMTGTVQSVAVDGRPGSRPWRRSREVGTSPEDLQELL 933

  Fly   480 ---PLQQQQ-QLHREHLMSTHARSVEHLNHYNGL--------DRRRDTPRQSESNTLRARLPSDM 532
               ||:..: .||::.:.:....||.     :||        ..|.|.|.|........|| ..:
  Rat   934 LPTPLEMHRVTLHKDPVRNDFGFSVS-----DGLLEKGVYVHTVRIDGPAQHGGLQPFDRL-LQV 992

  Fly   533 RSVKSLDFD-------------------SENESKPATETRTTRPTP-PKKP 563
            ..|::.|||                   |.|   |..::|.|...| |..|
  Rat   993 NHVRTRDFDCCLAVPLLAEAGDILELVVSRN---PLAQSRRTPGAPGPSSP 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 12/41 (29%)
Grip2NP_612544.2 PDZ_signaling 51..133 CDD:238492
PDZ_signaling 153..236 CDD:238492
PDZ_signaling 251..334 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..450
PDZ_signaling 456..544 CDD:238492 9/34 (26%)
PDZ_signaling 557..640 CDD:238492 23/90 (26%)
PDZ_signaling 657..737 CDD:238492 18/84 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 745..769 2/23 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 786..863 18/93 (19%)
PDZ_signaling 941..1020 CDD:238492 16/84 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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