DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and Patj

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_766284.2 Gene:Patj / 12695 MGIID:1277960 Length:1834 Species:Mus musculus


Alignment Length:495 Identity:102/495 - (20%)
Similarity:177/495 - (35%) Gaps:159/495 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GGTLSSRSTRSESKELRSALQDREAVIQNLRIQLCLGKLPRPTGPPLDESEKPAAEQKLNRLKTE 139
            |..|.:.|.....:.::||......|:|:      |...||......::.:.||..|..|..:.:
Mouse  1136 GVDLQNASHAEAVEAIKSAGNPVVFVVQS------LSSTPRVIPTVNNKGKTPAPNQDQNTQERK 1194

  Fly   140 AENK-------------RIKIKNLKSALEKLDITDNIDIRIRQAELEYALGREELQMLSIVEEAR 191
            |:..             |....:::.:.|...:||. .||.|.|:|.   |.     |.|:|   
Mouse  1195 AKRHGTAPPPMKLPPPYRAPSADMEGSEEDCALTDK-KIRQRYADLP---GE-----LHIIE--- 1247

  Fly   192 ALQARLEKSKPEAQTLYNIISSGVSLSLHAVHATSGRWAVQQRTDQPGFYVEWALEG----DGLY 252
                 |||.|           :|:.|||      :|.   :.|:....|.|....||    ||..
Mouse  1248 -----LEKDK-----------NGLGLSL------AGN---KDRSRMSIFVVGINPEGPAAADGRM 1287

  Fly   253 K-GDRILEINGRLVTGKSKEELQKQVGNS-GKCQMVVLRKKS-------VPIPQ----------- 297
            : ||.:||||.:::.|:|.:.....:..: .:.::|.:|.:.       .|.|:           
Mouse  1288 RIGDELLEINNQILYGRSHQNASAIIKTAPTRVKLVFIRNEDAVSQMAVAPFPELSHSPSPVEDL 1352

  Fly   298 ---KQLDQEKENNMRLQHRISYLEEQVRELQTVKEHHPSQQQQQQQQQQQNPQQNPQQNPQQTSS 359
               :.:..|:|:::..:|.......:..:|..|.:   .....:||::.::|.....|..|||.|
Mouse  1353 GGTELVSSEEESSVDAKHLPEPESSKPEDLSQVVD---DNMVAEQQKESESPDSAACQIKQQTYS 1414

  Fly   360 NQSQHVTSISISSP-------------------------------PSTPPEKP---LIFQ----R 386
            .|....:..|.|||                               |:|.|..|   :|.:    |
Mouse  1415 TQVSSSSQDSPSSPAPLCQSAHADVTGSGNFQAPLPVDPAPLSVDPATCPIVPGQEMIIEISKGR 1479

  Fly   387 GNYITTLVGGK--PIELM--------------GDDMASTQTPPGHVTKTLIKENTHIDLRDRLSH 435
            .....::||||  |::.:              |...|..|          |.|...:|||.. ||
Mouse  1480 SGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQ----------ILEVNGVDLRSS-SH 1533

  Fly   436 MYSMPSKSLSASKISINSDSAYMQHHRRDKERHRDRQHRE 475
            ..::.:...:..|:.:   ..|     ||:.::||.::.|
Mouse  1534 EEAITALRQTPQKVRL---VVY-----RDEAQYRDEENLE 1565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 13/46 (28%)
PatjNP_766284.2 L27_2 8..65 CDD:312549
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 248..325 CDD:238492
PDZ_signaling 363..450 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..488
PDZ_signaling 572..636 CDD:238492
PDZ 685..774 CDD:214570
PDZ_signaling 1072..1163 CDD:238492 6/26 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1171..1219 6/47 (13%)
PDZ 1242..1327 CDD:214570 28/117 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1340..1453 19/115 (17%)
MPDZ_u10 <1453..1468 CDD:374710 3/14 (21%)
PDZ 1469..1554 CDD:214570 19/103 (18%)
PDZ_signaling 1566..1646 CDD:238492 102/495 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1657..1676
PDZ_signaling 1707..1792 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1811..1834
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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