DRSC/TRiP Functional Genomics Resources

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Protein Alignment sprt and Gm20498

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001296776.1 Gene:Gm20498 / 105940408 MGIID:5141963 Length:182 Species:Mus musculus


Alignment Length:176 Identity:38/176 - (21%)
Similarity:74/176 - (42%) Gaps:44/176 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 NIISSGVSLSLHAVHATSGRWAVQQRTDQPGFYV-----EWALEGDG-LYKGDRILEINGR---- 263
            |:......|..:.|..|..::.    ::..|.||     :.|...|| |.:||:||.:||:    
Mouse    15 NLTRGPSGLGFNIVGGTDQQYV----SNDSGIYVSRIKEDGAAAQDGRLQEGDKILSVNGQDLKN 75

  Fly   264 ---------------LVTGKSKEELQKQVGNSGKCQMVVLRKKSVPIPQKQLDQEKENNMRLQHR 313
                           .|:.:.:..|....|:.|..:...:|..:|.|   ::|.|.|..::: ::
Mouse    76 LLHQDAVDLFRNAGCAVSLRVQHRLLVVGGSFGLREFSQIRYDAVTI---KIDPELEKKLKV-NK 136

  Fly   314 ISYLEEQVRELQTVKEHHPSQQQQQQQQQQQNPQQNPQ----QNPQ 355
            |: ||.   |.:.:|:   |..:..:..:...|.::||    :||:
Mouse   137 IT-LES---EYEKIKD---STFENWKNIRGPRPWEDPQLLQGRNPE 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 13/60 (22%)
Gm20498NP_001296776.1 PDZ_signaling 13..97 CDD:238492 18/85 (21%)
COX16 100..164 CDD:372923 16/74 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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