DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and PATJ

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_011538764.1 Gene:PATJ / 10207 HGNCID:28881 Length:1937 Species:Homo sapiens


Alignment Length:642 Identity:123/642 - (19%)
Similarity:210/642 - (32%) Gaps:230/642 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RRKGGSLGGTLSSRSTRSESKELRSALQDREAVIQNLRIQLCLGKLPRPTGPPLDESEKPAAEQK 132
            |..|..:..||..|.|.|.:..|... .||..|::.|                     ||.|...
Human   439 RNAGQVVHLTLVRRKTSSSTSPLEPP-SDRGTVVEPL---------------------KPPALFL 481

  Fly   133 LNRLKTE----AENKRIK--IKNLKS----ALEKLD-ITDNIDIRIRQAELEYALGREELQMLSI 186
            ...::||    .|::.||  |..||:    |||||: :.|:.:..:: :..|..||.:...|::.
Human   482 TGAVETETNVDGEDEEIKERIDTLKNDNIQALEKLEKVPDSPENELK-SRWENLLGPDYEVMVAT 545

  Fly   187 VEEARALQARLEKSKPEAQTLYNIISSGVSLSLHAVHATSGRWAVQQRTDQPGFYVEWALEGD-- 249
            ::...|..|.|:|        |:.:     |.:|.:     |..|:..:.....|:...:.|.  
Human   546 LDTQIADDAELQK--------YSKL-----LPIHTL-----RLGVEVDSFDGHHYISSIVSGGPV 592

  Fly   250 ---GLYK-GDRILEINGRLVTGKSKEELQKQVGNSGKCQMVVLRKKSVPIP------QKQLDQEK 304
               ||.: .|.:||:||..:.|||:.|             .|...|.||.|      ::..|.| 
Human   593 DTLGLLQPEDELLEVNGMQLYGKSRRE-------------AVSFLKEVPPPFTLVCCRRLFDDE- 643

  Fly   305 ENNMRLQHRISYLEEQVRELQTVKEHHPSQQQQQQQQQQQNPQQNPQQNPQQTSSNQSQHVT--- 366
                                .:|.|...::....:.:...|...|.:::.....:..|..|.   
Human   644 --------------------ASVDEPRRTETSLPETEVDHNMDVNTEEDDDGELALWSPEVKIVE 688

  Fly   367 ----------SISISSPPSTPPEKPLIFQRGNYITTLVGGKPIE-----LMGDDMASTQ------ 410
                      ||.....|..|....::      |.:||.....|     |.||.:.|..      
Human   689 LVKDCKGLGFSILDYQDPLDPTRSVIV------IRSLVADGVAERSGGLLPGDRLVSVNEYCLDN 747

  Fly   411 ------------TPPG--H--VTKTLIKENTHIDLRDRLSHMYSMPSKSLSASKISINSDSAYMQ 459
                        .|||  |  :.|.|:::|                           ..:|.|:.
Human   748 TSLAEAVEILKAVPPGLVHLGICKPLVEDN---------------------------EEESCYIL 785

  Fly   460 H--HRRDKERHRDRQH-------RERP---RDPLQQQQQLHREHLM----STHARSVEHLNHYNG 508
            |  ...||.......|       .|.|   ||....:::|..|..:    |.|::..|       
Human   786 HSSSNEDKTEFSGTIHDINSSLILEAPKGFRDEPYFKEELVDEPFLDLGKSFHSQQKE------- 843

  Fly   509 LDRRRDTPRQSESNTLRARLPSDMRSVKSLDFDSENESKPATETRTTRPTPPKKPLRLSLQRAQS 573
            :::.::.....|..|.|.:   :|...:.:..|.|.|       ....|:|              
Human   844 IEQSKEAWEMHEFLTPRLQ---EMDEEREILVDEEYE-------LYQDPSP-------------- 884

  Fly   574 LQTVELHPCADIERKRPMKRVHH--------NNNNNNKGGESPTGEGQTMLIENCSP 622
              ::||:|.:.|:...|:..|:.        ::|..::..|:.|  |:|:..:...|
Human   885 --SMELYPLSHIQEATPVPSVNELHFGTQWLHDNEPSESQEART--GRTVYSQEAQP 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 12/46 (26%)
PATJXP_011538764.1 L27_2 8..65 CDD:117611
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 246..325 CDD:238492
PDZ_signaling 366..450 CDD:238492 3/10 (30%)
PDZ_signaling 570..634 CDD:238492 19/76 (25%)
PDZ 683..772 CDD:214570 17/94 (18%)
PDZ_signaling 1066..1157 CDD:238492
PDZ 1236..1321 CDD:214570
PDZ 1459..1574 CDD:214570
PDZ_signaling 1586..1666 CDD:238492
PDZ_signaling 1729..1814 CDD:238492
PDZ_signaling 1852..1936 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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