DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sprt and cytip

DIOPT Version :9

Sequence 1:NP_610683.1 Gene:sprt / 246397 FlyBaseID:FBgn0082585 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_003199223.2 Gene:cytip / 100537036 ZFINID:ZDB-GENE-140106-76 Length:343 Species:Danio rerio


Alignment Length:226 Identity:54/226 - (23%)
Similarity:90/226 - (39%) Gaps:56/226 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 ALEGDGLYKGDRILEINGRLVTGKSKE---ELQKQVGNSGKCQMVVLRKKSVPIPQKQLDQEKEN 306
            |.|..||..||.||.:||..:.|.:.:   ||.::..|:.|.:.|   ..||   .|:::.||  
Zfish   120 AAETAGLTAGDIILSVNGVSIEGSTHQNIIELIRESSNTLKLETV---SGSV---MKRIELEK-- 176

  Fly   307 NMRLQHRISYLEEQVR----ELQ--TVKEHHPSQQQQQQQQQQ---------QNPQQNPQQNPQQ 356
                  ::.||::.:|    |||  |:||...:|....:..|.         .:|.....|....
Zfish   177 ------KMHYLKQTLREKWVELQSLTLKEKRLTQGNLNESAQYLSVDSVMSLSSPMGRSGQRFSS 235

  Fly   357 TSSNQS---------QHVTSISISSPPSTPPEKPLIFQRGNYITTLVGG-------KPIELMGDD 405
            .||.:|         ..::|:...|.|.:|.|     ..|::....||.       :.|.|.|.:
Zfish   236 DSSCRSIMTDDSEDGAFMSSVFDDSSPLSPIE-----SSGSFFQLEVGALRPITRTRSISLTGSN 295

  Fly   406 MAST---QTPPGHVTKTLIKENTHIDLRDRL 433
            .:.:   :|.|..:..||.:.:....:|..|
Zfish   296 SSLSPGWETSPSSLFGTLPRRSRKGSVRKHL 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sprtNP_610683.1 PDZ <247..288 CDD:294084 15/43 (35%)
cytipXP_003199223.2 PDZ_signaling 78..162 CDD:238492 15/41 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.