DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl13 and Adgrd1

DIOPT Version :10

Sequence 1:NP_788325.2 Gene:mthl13 / 246395 FlyBaseID:FBgn0050018 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001419043.1 Gene:Adgrd1 / 689257 RGDID:1594795 Length:903 Species:Rattus norvegicus


Alignment Length:295 Identity:59/295 - (20%)
Similarity:106/295 - (35%) Gaps:67/295 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 ISHK--FSSIESPGAFELASGSIICY---IIIFGIYLFVKELRNDFGKCVMSCVFCLFLDYLIWL 215
            :.|:  .|||...|    .|.|::|.   ::.|.:...|..:||.......:..|.:       |
  Rat   589 LGHQVALSSISYVG----CSLSVLCLAATLVTFAVLSSVSTIRNQRYHIHANLSFAV-------L 642

  Fly   216 MDELRLLDDF--------CSLTGYIMFFFDFANSVWFSIISYCIWKKITSVVSQENRDQFVFYST 272
            :.::.||..|        |.:...::.:|......|..:....::..:..|...|: .:.::|  
  Rat   643 VAQVLLLISFSMEPGTVPCQVLAVLLHYFFLTAFAWMLVEGLHLYSMVIKVFGSED-SKHLYY-- 704

  Fly   273 FAYGIS-AIPLGI-IISINQFWEEDLRKWNWLPLVGFSRCSVDDC---KRSSWVYYFV-PYAIMC 331
              |||. ..||.| |||::...:              |..:.|.|   ..|..::.|| |..::.
  Rat   705 --YGIGWGCPLLICIISVSSSMD--------------SYGTGDSCWLSVESGAIWAFVGPALLVI 753

  Fly   332 AINIIMFVL---TIKHIMKTKRNLHNLTKRPDRNETCVTVNFLNFELYLLFLRISGIMGVAWILI 393
            .:||::.|.   .|.||......:|............|.|             :..|:|.:|:..
  Rat   754 VVNIVILVAVTRVISHISTDSYKIHGDPSAFKLTAKAVAV-------------LLPILGTSWVFG 805

  Fly   394 IFLLIEVNSTFWDIFGIIIQQIHYGFGIILFVLLI 428
            :..:.:....|..:|.|:  ....|..|.||..|:
  Rat   806 VLAVSDRALVFQYMFAIL--NSSQGLFIFLFHCLL 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl13NP_788325.2 Mth_Ecto <49..158 CDD:448329 0/1 (0%)
7tm_GPCRs 186..440 CDD:475119 50/260 (19%)
TM helix 2 197..218 CDD:410628 2/20 (10%)
TM helix 3 227..249 CDD:410628 2/21 (10%)
TM helix 4 269..285 CDD:410628 7/17 (41%)
TM helix 5 316..339 CDD:410628 6/23 (26%)
TM helix 6 376..397 CDD:410628 3/20 (15%)
TM helix 7 402..431 CDD:410628 8/27 (30%)
Adgrd1NP_001419043.1 Laminin_G_3 <199..273 CDD:463865
GPS 537..584 CDD:197639
7tm_GPCRs 592..851 CDD:475119 58/292 (20%)
TM helix 1 595..619 CDD:410628 8/27 (30%)
TM helix 2 631..652 CDD:410628 4/27 (15%)
TM helix 3 662..684 CDD:410628 2/21 (10%)
TM helix 4 703..719 CDD:410628 8/19 (42%)
TM helix 5 738..761 CDD:410628 6/22 (27%)
TM helix 6 788..810 CDD:410628 5/34 (15%)
TM helix 7 814..839 CDD:410628 8/27 (30%)
Blue background indicates that the domain is not in the aligned region.

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