DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl13 and Adgrl1

DIOPT Version :10

Sequence 1:NP_788325.2 Gene:mthl13 / 246395 FlyBaseID:FBgn0050018 Length:440 Species:Drosophila melanogaster
Sequence 2:XP_038953894.1 Gene:Adgrl1 / 65096 RGDID:620768 Length:1472 Species:Rattus norvegicus


Alignment Length:268 Identity:52/268 - (19%)
Similarity:109/268 - (40%) Gaps:60/268 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 SIICYIIIFGIYLFVKELRNDFGKCVMSCVFCLFLDYLIWL--MDELRLLDDFCSLTGYIMFFFD 237
            |::|..|....:.|::.|:.|......:....|||..|::|  :|:.: .:..|.:...::.:|.
  Rat   871 SLVCLAICISTFCFLRGLQTDRNTIHKNLCINLFLAELLFLVGIDKTQ-YEVACPIFAGLLHYFF 934

  Fly   238 FANSVWFSIISYCIWKKITSVVSQE-NRDQFVFYSTFAYGISAIPLGIIISINQFWEEDLRKWN- 300
            .|...|..:....::..:..|...| :|.:  :|....|...|:.:||..:|      |.|.:. 
  Rat   935 LAAFSWLCLEGVHLYLLLVEVFESEYSRTK--YYYLGGYCFPALVVGIAAAI------DYRSYGT 991

  Fly   301 ----WLPLVGFSRCSVDDCKRSSWVYYFV-----PYAIMCAINIIMFVLTIKHIMKTKRNLHNLT 356
                ||        .||:        ||:     |.:.:..:|::..::|:..::::...|    
  Rat   992 EKACWL--------RVDN--------YFIWSFIGPVSFVIVVNLVFLMVTLHKMIRSSSVL---- 1036

  Fly   357 KRPDRNETCVTVNFLNFELYLLFLRISGIMGVAWILIIFLLIEVNSTFWDIFGIIIQQIHYGF-- 419
             :||.:......::....:.||||     :|:.|   .|.|:.:|..     .:::..:...|  
  Rat  1037 -KPDSSRLDNIKSWALGAIALLFL-----LGLTW---AFGLLFINKE-----SVVMAYLFTTFNA 1087

  Fly   420 --GIILFV 425
              |:.:||
  Rat  1088 FQGVFIFV 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl13NP_788325.2 Mth_Ecto <49..158 CDD:448329
7tm_GPCRs 186..440 CDD:475119 49/257 (19%)
TM helix 2 197..218 CDD:410628 5/22 (23%)
TM helix 3 227..249 CDD:410628 3/21 (14%)
TM helix 4 269..285 CDD:410628 4/15 (27%)
TM helix 5 316..339 CDD:410628 4/27 (15%)
TM helix 6 376..397 CDD:410628 7/20 (35%)
TM helix 7 402..431 CDD:410628 4/28 (14%)
Adgrl1XP_038953894.1 Gal_Rha_Lectin_LPHN1 35..131 CDD:438701
OLF 143..399 CDD:470611
PHA03247 <399..483 CDD:223021
HormR 477..540 CDD:214468
GAIN 550..774 CDD:465137
GPS 798..850 CDD:197639
7tmB2_Latrophilin-1 857..1114 CDD:320673 52/268 (19%)
TM helix 1 859..884 CDD:320673 3/12 (25%)
TM helix 2 893..915 CDD:320673 5/21 (24%)
TM helix 3 924..951 CDD:320673 3/26 (12%)
TM helix 4 963..983 CDD:320673 5/21 (24%)
TM helix 5 1000..1029 CDD:320673 6/36 (17%)
TM helix 6 1045..1072 CDD:320673 8/34 (24%)
TM helix 7 1076..1101 CDD:320673 4/20 (20%)
Latrophilin 1113..1472 CDD:460538
Blue background indicates that the domain is not in the aligned region.

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