DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl13 and Dh44-R1

DIOPT Version :10

Sequence 1:NP_788325.2 Gene:mthl13 / 246395 FlyBaseID:FBgn0050018 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_610960.1 Gene:Dh44-R1 / 36601 FlyBaseID:FBgn0033932 Length:504 Species:Drosophila melanogaster


Alignment Length:416 Identity:84/416 - (20%)
Similarity:146/416 - (35%) Gaps:130/416 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 CSFKEHLFRTKLDLNIRLDDNSTEALYFNNQTLLITSF-----WD------------IDEMMGLR 112
            |..:||:            :.||   |.|:....:|.|     |.            :||:.|: 
  Fly    35 CLVQEHI------------EAST---YGNDSGHCLTQFDSILCWPRTARGTLAVLQCMDELQGI- 83

  Fly   113 RDEYTLYKNGTIYIHSDQSIQTKEEYCFY-------------PHQIYSDFPETIWIISHKFSSIE 164
              .|...||.|.:.|::   .|.|:|..|             ..::..:.|..|:.|.:..|.: 
  Fly    84 --HYDSSKNATRFCHAN---GTWEKYTNYDACAHLPAPESVPEFEVIVELPTIIYYIGYTLSLV- 142

  Fly   165 SPGAFELASGSIICYIIIFGIYLFVKELR--------NDFGKCVMSCVFCLFLDYLIWLMDELRL 221
                      |:...:|:|.   :.||||        |.|...:||.:|.:.   |:.:...:|.
  Fly   143 ----------SLSLALIVFA---YFKELRCLRNTIHANLFFTYIMSALFWIL---LLSVQISIRS 191

  Fly   222 LDDFCSLTGYIMFFFDFANSVWFSIISYCIWKKITSVVSQENRDQFVFYSTFAYGISAI------ 280
            ....|.....:..||...|..|..:....::..:....|.:|. :|..|::..:|..|:      
  Fly   192 GVGSCIALITLFHFFTLTNFFWMLVEGLYLYMLVVKTFSGDNL-RFNIYASIGWGGPALFVVTWA 255

  Fly   281 ---PLGIIISINQFWEEDLRKWNWLPLVGFSRCSVDDCKRSSWVYYFVPYAIMCAINII--MFVL 340
               .|.:..|..:.:|.:.   .|:     ....||      |:|    ...:||:.||  .|:|
  Fly   256 VAKSLTVTYSTPEKYEINC---PWM-----QETHVD------WIY----QGPVCAVLIINLTFLL 302

  Fly   341 TIKHIMKTK-RNLHNLTKRPDRNET---CVTVNFLNFELYLLFL---RISGIMGVAWILIIFLLI 398
            .|..::.|| |:.:.:..|..|...   .|.:..... .||:.|   ..||:||..:.::..:|:
  Fly   303 RIMWVLITKLRSANTVETRQYRKAAKALLVLIPLFGI-TYLVVLAGPSESGLMGHMFAVLRAVLL 366

  Fly   399 EVNSTFWDIFGIIIQQIHYGFGIILF 424
            ...                ||.:.||
  Fly   367 STQ----------------GFSVSLF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl13NP_788325.2 Mth_Ecto <49..158 CDD:448329 25/122 (20%)
7tm_GPCRs 186..440 CDD:475119 55/265 (21%)
TM helix 2 197..218 CDD:410628 4/20 (20%)
TM helix 3 227..249 CDD:410628 4/21 (19%)
TM helix 4 269..285 CDD:410628 4/24 (17%)
TM helix 5 316..339 CDD:410628 6/24 (25%)
TM helix 6 376..397 CDD:410628 7/23 (30%)
TM helix 7 402..431 CDD:410628 4/23 (17%)
Dh44-R1NP_610960.1 HRM 52..112 CDD:397086 15/65 (23%)
7tmB1_DH_R 126..394 CDD:320391 62/304 (20%)
TM helix 1 128..153 CDD:320391 7/38 (18%)
TM helix 2 162..184 CDD:320391 6/24 (25%)
TM helix 3 197..224 CDD:320391 4/26 (15%)
TM helix 4 236..256 CDD:320391 4/19 (21%)
TM helix 5 279..308 CDD:320391 11/38 (29%)
TM helix 6 322..349 CDD:320391 5/27 (19%)
TM helix 7 356..381 CDD:320391 5/37 (14%)

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