DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl13 and Pdfr

DIOPT Version :10

Sequence 1:NP_788325.2 Gene:mthl13 / 246395 FlyBaseID:FBgn0050018 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster


Alignment Length:265 Identity:47/265 - (17%)
Similarity:99/265 - (37%) Gaps:70/265 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 DFGKCVMSCVFCLF-------LDYLIWLMDELRLLDDFCSLTGYIMFFFDFANSVWFSIISYCIW 252
            |:|.|....:..|.       .|..|.:....|.|:    :.|..:..|    ::..|::.:|.:
  Fly   278 DYGPCYKPEIIRLMQQMGSKDFDAYIDIARRTRTLE----IVGLCLSLF----ALIVSLLIFCTF 334

  Fly   253 KKITSVVSQENRDQFVFYSTFAYGISAIPLGIIISINQFWEEDLRKWNWLPLVGFSRCSVDD--- 314
            :.:.:..::.:::.||          |:.|.:||.:..:.:: .|:.|.......|...:::   
  Fly   335 RSLRNNRTKIHKNLFV----------AMVLQVIIRLTLYLDQ-FRRGNKEAATNTSLSVIENTPY 388

  Fly   315 -CKRSSWVYYFVPYAIMCAINIIMFVLTIKHIMKTKRNLHNLTKRPDRNETCVTVNFLNFELYLL 378
             |:.|   |..:.|| ..|:.:.||:..:        .|||:          |||........|.
  Fly   389 LCEAS---YVLLEYA-RTAMFMWMFIEGL--------YLHNM----------VTVAVFQGSFPLK 431

  Fly   379 FLRISG-----IMGVAWILIIFLLIEV---------NST--FWDIFG--IIIQQIHYGFGIILFV 425
            |....|     :|...|.....:.::.         |.|  :|.:.|  :.:..:::.|.:.:..
  Fly   432 FFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYNLTPYYWILEGPRLAVILLNFCFLVNIIR 496

  Fly   426 LLIFK 430
            :|:.|
  Fly   497 VLVMK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl13NP_788325.2 Mth_Ecto <49..158 CDD:448329
7tm_GPCRs 186..440 CDD:475119 47/265 (18%)
TM helix 2 197..218 CDD:410628 5/27 (19%)
TM helix 3 227..249 CDD:410628 3/21 (14%)
TM helix 4 269..285 CDD:410628 2/15 (13%)
TM helix 5 316..339 CDD:410628 6/22 (27%)
TM helix 6 376..397 CDD:410628 5/25 (20%)
TM helix 7 402..431 CDD:410628 6/33 (18%)
PdfrNP_001245501.1 HRM 213..272 CDD:397086
7tmB1_PDFR 306..584 CDD:320389 41/237 (17%)
TM helix 1 308..333 CDD:320389 5/32 (16%)
TM helix 2 342..364 CDD:320389 6/31 (19%)
TM helix 3 391..418 CDD:320389 9/38 (24%)
TM helix 4 430..450 CDD:320389 5/19 (26%)
TM helix 5 469..498 CDD:320389 4/28 (14%)
TM helix 6 512..539 CDD:320389
TM helix 7 546..571 CDD:320389
Blue background indicates that the domain is not in the aligned region.

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