DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl13 and Adgrb3

DIOPT Version :10

Sequence 1:NP_788325.2 Gene:mthl13 / 246395 FlyBaseID:FBgn0050018 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001100368.1 Gene:Adgrb3 / 301309 RGDID:1309703 Length:1522 Species:Rattus norvegicus


Alignment Length:459 Identity:69/459 - (15%)
Similarity:154/459 - (33%) Gaps:130/459 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVLILLQFQAVNTD----------SNKTEEDSCVKSDDDNSNDEDDLWHCIPICCPRKNMMANGG 64
            ::::.::.:...||          :|.|....||..||..||:....|             :..|
  Rat   787 IIVVTIRPEPKRTDAFLEIELAHLANGTLNPYCVLWDDSKSNESLGTW-------------STQG 838

  Fly    65 CSFKEHLFRTKLDLNIRLDDNSTEALYFNNQTLLITSFWDIDEMMGLRRDEYTLYKNGTIYIHSD 129
            |.            .:..|.:.|:.|.....|..|         :..:..|..:..:||      
  Rat   839 CK------------TVLTDASHTKCLCDRLSTFAI---------LAQQPREIVMESSGT------ 876

  Fly   130 QSIQTKEEYCFYPHQIYSDFPETIWIISHKFSSIESPGAFELASGSIICYIIIF-GIYLFVKELR 193
                                |....|:....|.:           ::|...::: .::.:::..|
  Rat   877 --------------------PSVTLIVGSGLSCL-----------ALITLAVVYAALWRYIRSER 910

  Fly   194 NDFGKCVMSCVFCLFL---DYLIWLMDELRLLDDFCSLTGYIMFFFDFANSVWFSIISYCIWKKI 255
            :     ::...|||.:   :.||.:..........|:.|...:.||..|:..|....::..:..:
  Rat   911 S-----IILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSYMAV 970

  Fly   256 TSVV-SQENRDQFVFYSTFAYGISAIPLGIIISINQFWEEDLRKWNWLPLVGFSRCSVDDCKRSS 319
            |..: ::..|.:|:   ...:|:.|:.:...:...:........:.||.|.|            .
  Rat   971 TGKIRTRLIRKRFL---CLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEG------------G 1020

  Fly   320 WVYYFV-PYAIMCAINIIMFVLT--------------IKHIMKTKRNLHN-LTKRPDR----NET 364
            .:|.|| |.|.:..:|:::.:|.              :||........|: ||.:..:    :.|
  Rat  1021 LLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTT 1085

  Fly   365 CVTVNFLNFELYLLFLR--ISGIMGVAWILIIFLLIEVNSTFWDIFGIIIQQIHYGFGIILFVLL 427
            .::....:..:..|:..  :..::.:.|:..:..:.:..|..:.|...:...:. || :|:.|..
  Rat  1086 ALSAATASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQ-GF-VIVMVHC 1148

  Fly   428 IFKR 431
            |.:|
  Rat  1149 ILRR 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl13NP_788325.2 Mth_Ecto <49..158 CDD:448329 12/108 (11%)
7tm_GPCRs 186..440 CDD:475119 44/272 (16%)
TM helix 2 197..218 CDD:410628 5/23 (22%)
TM helix 3 227..249 CDD:410628 5/21 (24%)
TM helix 4 269..285 CDD:410628 2/15 (13%)
TM helix 5 316..339 CDD:410628 6/23 (26%)
TM helix 6 376..397 CDD:410628 2/22 (9%)
TM helix 7 402..431 CDD:410628 7/28 (25%)
Adgrb3NP_001100368.1 AGRB_N 30..201 CDD:465991
TSP1 296..343 CDD:214559
TSP1 348..398 CDD:214559
TSP1 403..452 CDD:214559
TSP1 458..508 CDD:214559
HormR 510..576 CDD:214468
GAIN 594..794 CDD:465137 0/6 (0%)
GPS 816..867 CDD:197639 14/84 (17%)
7tmB2_BAI3 872..1164 CDD:320655 50/340 (15%)
TM helix 1 876..901 CDD:320655 5/61 (8%)
TM helix 2 911..933 CDD:320655 5/26 (19%)
TM helix 3 942..970 CDD:320655 5/27 (19%)
TM helix 4 980..1000 CDD:320655 4/22 (18%)
TM helix 5 1018..1047 CDD:320655 8/40 (20%)
TM helix 6 1094..1121 CDD:320655 2/26 (8%)
TM helix 7 1126..1151 CDD:320655 6/26 (23%)
Blue background indicates that the domain is not in the aligned region.

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