DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl13 and Adgrf5

DIOPT Version :10

Sequence 1:NP_788325.2 Gene:mthl13 / 246395 FlyBaseID:FBgn0050018 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001391458.1 Gene:Adgrf5 / 224792 MGIID:2182928 Length:1406 Species:Mus musculus


Alignment Length:276 Identity:51/276 - (18%)
Similarity:113/276 - (40%) Gaps:43/276 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 CYIIIFGIYLFVKELRNDFGK--CVMSCVFCLFL-DYLIWLM-------DELRLLDDFCSLTGYI 232
            |.::...::..|.:.|..:.:  |:::..|||.: |  ||.:       ....|.:..|....:.
Mouse  1090 CLVVEAMVWKSVTKNRTSYMRHICIVNIAFCLLIAD--IWFIVAGAIHDGRYPLNETACVAATFF 1152

  Fly   233 MFFFDFANSVWFSIISYCIWKKITSVVSQENRD-QFVFYSTFAYGISAIPLGIIISINQFWEEDL 296
            :.||..:...|...:...::.::..::...::. |.....:..||...|...|.:.:.|..|..:
Mouse  1153 IHFFYLSVFFWMLTLGLMLFYRLIFILHDASKSTQKAIAFSLGYGCPLIISSITVGVTQPQEVYM 1217

  Fly   297 RK---W-NWLPLVGFSRCSVDDCKRSSWVYYFVPYAIMCAINIIMFVLTIKHIMKTKRNLHNLTK 357
            ||   | ||           :|.:  :.:.:.:|..|:..:|:.:.|:.|..|::.     ::..
Mouse  1218 RKNACWLNW-----------EDTR--ALLAFAIPALIIVVVNVSITVVVITKILRP-----SIGD 1264

  Fly   358 RPDRNETCVTVNFLNFELYLLFLRISGIMGVAWILIIFLLIE-VNSTFWDIFGIIIQQIHYGFGI 421
            :|.:.|....     |::......::.::|:.|...:..:|: .|:.|..||.::  ....|..|
Mouse  1265 KPGKQEKSSL-----FQISKSIGVLTPLLGLTWGFGLATVIQGSNAVFHIIFTLL--NAFQGLFI 1322

  Fly   422 ILFVLLIFKRSTHQLL 437
            :||..|..::....||
Mouse  1323 LLFGCLWDQKVQEALL 1338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl13NP_788325.2 Mth_Ecto <49..158 CDD:448329
7tm_GPCRs 186..440 CDD:475119 50/268 (19%)
TM helix 2 197..218 CDD:410628 7/30 (23%)
TM helix 3 227..249 CDD:410628 3/21 (14%)
TM helix 4 269..285 CDD:410628 3/15 (20%)
TM helix 5 316..339 CDD:410628 3/22 (14%)
TM helix 6 376..397 CDD:410628 2/20 (10%)
TM helix 7 402..431 CDD:410628 8/28 (29%)
Adgrf5NP_001391458.1 IG_like 301..375 CDD:214653
Ig strand B 305..309 CDD:409353
Ig strand C 318..321 CDD:409353
Ig strand E 332..337 CDD:409353
ig 531..608 CDD:395002
GPS 1009..1056 CDD:460350
7tm_GPCRs 1070..1343 CDD:475119 51/276 (18%)
TM helix 1 1072..1096 CDD:410628 1/5 (20%)
TM helix 2 1111..1132 CDD:410628 7/22 (32%)
TM helix 3 1147..1169 CDD:410628 3/21 (14%)
TM helix 4 1190..1206 CDD:410628 3/15 (20%)
TM helix 5 1228..1251 CDD:410628 4/24 (17%)
TM helix 6 1278..1300 CDD:410628 2/21 (10%)
TM helix 7 1305..1330 CDD:410628 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.