DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl13 and adgre15

DIOPT Version :10

Sequence 1:NP_788325.2 Gene:mthl13 / 246395 FlyBaseID:FBgn0050018 Length:440 Species:Drosophila melanogaster
Sequence 2:XP_021333205.2 Gene:adgre15 / 100536619 ZFINID:ZDB-GENE-121214-33 Length:857 Species:Danio rerio


Alignment Length:435 Identity:87/435 - (20%)
Similarity:150/435 - (34%) Gaps:127/435 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DSCVKSDDDNSNDEDDLWHCIPICCPRKNMMANGGCSF----------KEHLFRTKLD------- 77
            |...:.|..||:.:.||   |.|.   ||.......:|          |...|.|..|       
Zfish   442 DKIPQLDTTNSSVDIDL---IGIA---KNNNDRSAVAFMSYTTMENLLKADFFNTTNDTIKTMMS 500

  Fly    78 --LNIRLDDNSTEAL------------YFNNQTLLITSFWDIDEMMGLRRDEYTLYKNGTIYIHS 128
              ::..|...|..||            .|.....|...:|:|.|.:          .:|...::|
Zfish   501 TVISATLPKTSNTALTKAVNFTFRHIREFEPSGSLSCVYWNISEWI----------VDGCSVLNS 555

  Fly   129 DQSIQTKEEYCFYPHQIYSDFPETIWIISHKFSSIESPGAFELASGSIICYIIIFGIYLFVKELR 193
            :.|    ...|...|.      .|..:|....||.......||.  .::|  :|.|:..|...|.
Zfish   556 NSS----HTVCSCVHL------STFALIMQTSSSPPPSDLLELL--GLVC--VIVGLVFFSLALL 606

  Fly   194 NDFGKCVMS-----------CVFCLFLDYLIWLMDE-----LRLLDDFC-SLTGYIMFFFDFANS 241
            : |..|..|           |: .|...:|::|:.:     :|.....| ::.|.:.|.| .:..
Zfish   607 S-FALCQWSPGVNNVARINICI-SLLSAHLLFLLTQQFLSLIRPQQVLCVAIAGLLHFLF-LSAF 668

  Fly   242 VWFSI----ISYCIWKKITSVVSQENRDQFVFYSTFAYGISAIPLGIIISINQFWEEDLRKWNWL 302
            ||..|    :..|:  |..|.:|.:.|:  |..|.|...|..:...:::.::            :
Zfish   669 VWMFIEAVLLFICV--KNLSQISSKKRE--VLSSGFLCVIGYVLAMVVVCVS------------I 717

  Fly   303 PLV----GFSRCSVDDCKRSSWVYYFVPYAIMCAINIIMFVLTIKHIMKTKRNLHNLTKRPDRNE 363
            .||    |...|.:...:...| .:..|..::.|:|:|:|...:..:..|.:||:....:..:.:
Zfish   718 GLVPEGYGSEHCWIKTDEGFIW-SFLGPVCVILALNLILFFKIVITLNSTLKNLNAEVSQMKQTK 781

  Fly   364 TCVTVNFLNFELYLLFLRISGIMGVAWIL-----------IIFLL 397
            ..|      |:....|:    ::|..|||           |:||:
Zfish   782 VMV------FKTLGQFV----VLGCPWILGFFTNGSEVLEIVFLI 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl13NP_788325.2 Mth_Ecto <49..158 CDD:448329 25/139 (18%)
7tm_GPCRs 186..440 CDD:475119 49/248 (20%)
TM helix 2 197..218 CDD:410628 6/31 (19%)
TM helix 3 227..249 CDD:410628 6/25 (24%)
TM helix 4 269..285 CDD:410628 3/15 (20%)
TM helix 5 316..339 CDD:410628 5/22 (23%)
TM helix 6 376..397 CDD:410628 7/31 (23%)
TM helix 7 402..431 CDD:410628
adgre15XP_021333205.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.