DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30016 and TTL

DIOPT Version :10

Sequence 1:NP_724982.1 Gene:CG30016 / 246393 FlyBaseID:FBgn0050016 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_200630.1 Gene:TTL / 835934 AraportID:AT5G58220 Length:324 Species:Arabidopsis thaliana


Alignment Length:131 Identity:40/131 - (30%)
Similarity:62/131 - (47%) Gaps:37/131 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 STHILDTSVGKAAANVRVTVSRLDEIQE--------------WRSLRAAQTDADGRC--LL---- 51
            :||:||.|.|..||.|.|.:    |:..              |.|:..:.||.|||.  |:    
plant   207 TTHVLDVSRGAPAAGVEVHL----EVWSGTTGPSFVHGGGGVWSSVGTSATDRDGRSGPLMDLVD 267

  Fly    52 -LEPGQFPGGIYKLTFHVGAYYAERNVRTLYPAIDLIVDCSENQ---NYHIPLLLNPFGYSTYRG 112
             |.|     |.|:::|....|    :....:|.:.::...:|:|   ::|:||||.||.:|||||
plant   268 ALNP-----GTYRISFDTAKY----SPGCFFPYVSIVFQVTESQKWEHFHVPLLLAPFSFSTYRG 323

  Fly   113 T 113
            :
plant   324 S 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30016NP_724982.1 hdxy_isourate 5..113 CDD:274364 39/129 (30%)
TTLNP_200630.1 PRK13798 13..160 CDD:470134
Transthyretin 206..323 CDD:459857 38/128 (30%)
Blue background indicates that the domain is not in the aligned region.

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