DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30016 and uraha

DIOPT Version :10

Sequence 1:NP_724982.1 Gene:CG30016 / 246393 FlyBaseID:FBgn0050016 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_001038917.2 Gene:uraha / 751742 ZFINID:ZDB-GENE-060825-253 Length:138 Species:Danio rerio


Alignment Length:114 Identity:42/114 - (36%)
Similarity:63/114 - (55%) Gaps:11/114 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 STHILDTSVGKAAANVRVTVSRLDEIQE-WRSLRAAQTDADGRCLLLEPG-----QFPGGIYKLT 65
            |||:|:.:.|...||:.:.:.|||.:.. |..|....|:.||||    ||     .|..|:||:.
Zfish    29 STHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRC----PGLITKENFIAGVYKMR 89

  Fly    66 FHVGAYYAERNVRTLYPAIDLIVDCSE-NQNYHIPLLLNPFGYSTYRGT 113
            |..|.|:........||.::::...:. :|:||:||||:.|.||||||:
Zfish    90 FETGKYWDALGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTYRGS 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30016NP_724982.1 hdxy_isourate 5..113 CDD:274364 41/112 (37%)
urahaNP_001038917.2 Transthyretin_like 26..138 CDD:100112 41/112 (37%)

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