DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30016 and ttr

DIOPT Version :10

Sequence 1:NP_724982.1 Gene:CG30016 / 246393 FlyBaseID:FBgn0050016 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_001005598.2 Gene:ttr / 449556 ZFINID:ZDB-GENE-040927-14 Length:149 Species:Danio rerio


Alignment Length:103 Identity:26/103 - (25%)
Similarity:49/103 - (47%) Gaps:3/103 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ILDTSVGKAAANVRVTVSRLDEIQEWRSLRAAQTDADGRC-LLLEPGQFPGGIYKLTFHVGAYYA 73
            |||...|..|.|:.:.:.|.|:...|..:.:.:.|..|.. .|:...:|..|:|::.|....|:.
Zfish    38 ILDAVKGTPAGNIALDLFRQDQGGTWEKIASGKVDMTGEVHNLITEQEFTPGVYRVEFDTLTYWK 102

  Fly    74 ERNVRTLYPAIDLIVD--CSENQNYHIPLLLNPFGYST 109
            .......:...|::.:  ...:::|.:.|||:||.|:|
Zfish   103 TEGRTPFHQLADVVFEAHAEGHRHYTLALLLSPFSYTT 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30016NP_724982.1 hdxy_isourate 5..113 CDD:274364 26/103 (25%)
ttrNP_001005598.2 Peptidase_M14NE-CP-C_like 26..144 CDD:473874 26/103 (25%)

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