DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30016 and Urah

DIOPT Version :10

Sequence 1:NP_724982.1 Gene:CG30016 / 246393 FlyBaseID:FBgn0050016 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_001127979.1 Gene:Urah / 293613 RGDID:1309350 Length:141 Species:Rattus norvegicus


Alignment Length:200 Identity:41/200 - (20%)
Similarity:60/200 - (30%) Gaps:38/200 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   678 PTPHSPQQPASSQHTPSLVVSVPLSTATVPGVNLPASNNSNSSSHTGSSSSSSSSSSNVNHSASS 742
            |..::...|.|.|..|..|      ..|..|:..|..|.....|....|:..|..:.....:|:.
  Rat    10 PDVNATFSPPSLQTLPQRV------NWTEHGMVSPVQNQGPCGSCWAFSAVGSLEAQMKRRTAAL 68

  Fly   743 NSNSTPNIVSPGHHQGSDRGGGGGSHINNSNNSNSNSGGNSNLYQQISHRAGDQLMNASTNRSSP 807
            ...|..|::......| :||..||...........|.|.:|:.:....|:.|             
  Rat    69 VPLSAQNLLDCSVSLG-NRGCKGGFLSRAFLYVIQNRGIDSSTFYPYEHKEG------------- 119

  Fly   808 VIQQQSTAQNIIQSSSSSSSTAGSSSSSTVGPSIGHHHLERQSPSMRSSPAGVTTGGANV-ITSL 871
                        ....|.|..||..:...:.|.  |:....||......|..|   |.|. :.|.
  Rat   120 ------------VCRYSVSGRAGYCTGFRIVPR--HNEAALQSAVANIGPVSV---GINAKLLSF 167

  Fly   872 HHSQS 876
            |..:|
  Rat   168 HRYRS 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30016NP_724982.1 hdxy_isourate 5..113 CDD:274364
UrahNP_001127979.1 TLP_HIUase 29..141 CDD:100114 25/139 (18%)
Blue background indicates that the domain is not in the aligned region.

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