DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30016 and Ttr

DIOPT Version :10

Sequence 1:NP_724982.1 Gene:CG30016 / 246393 FlyBaseID:FBgn0050016 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_036813.2 Gene:Ttr / 24856 RGDID:3916 Length:147 Species:Rattus norvegicus


Alignment Length:103 Identity:23/103 - (22%)
Similarity:46/103 - (44%) Gaps:3/103 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ILDTSVGKAAANVRVTVSRLDEIQEWRSLRAAQTDADGRCL-LLEPGQFPGGIYKLTFHVGAYYA 73
            :||...|..|.:|.|.|.:......|....:.:|...|... |....:|..|:|::.....:|:.
  Rat    36 VLDAVRGSPAVDVAVKVFKKTADGSWEPFASGKTAESGELHGLTTDEKFTEGVYRVELDTKSYWK 100

  Fly    74 ERNVRTLYPAIDLIVDCSE--NQNYHIPLLLNPFGYST 109
            ...:...:...:::...::  :::|.|..||:|:.|||
  Rat   101 ALGISPFHEYAEVVFTANDSGHRHYTIAALLSPYSYST 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30016NP_724982.1 hdxy_isourate 5..113 CDD:274364 23/103 (22%)
TtrNP_036813.2 TR_THY 27..147 CDD:128406 23/103 (22%)

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