DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30010 and F59C6.12

DIOPT Version :10

Sequence 1:NP_724847.2 Gene:CG30010 / 246389 FlyBaseID:FBgn0050010 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001021522.1 Gene:F59C6.12 / 3565901 WormBaseID:WBGene00044251 Length:173 Species:Caenorhabditis elegans


Alignment Length:188 Identity:85/188 - (45%)
Similarity:112/188 - (59%) Gaps:19/188 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LKFVRSPSISCRYVQYNQGQSPEPKIREYFYYIDHEGMLFLDDAKMKNFTSCFKEKDFLKFFFNR 76
            |.|.||        .|.|||. ..||||||||:.|.|.|||||::|||||:.:|:..||.||:.:
 Worm     3 LTFARS--------LYTQGQY-NGKIREYFYYVSHNGFLFLDDSRMKNFTAAYKDIQFLNFFYRK 58

  Fly    77 LRLNKTSRYESEFPYISLCGRERNFIRCDDTPVVFTEQLRKDDTEVLSYAHAGQ-VLTLPYEPHK 140
            ::.|||.|||..||::||||.||||:||||||:|:||   .|.||  .....|| .:...::|..
 Worm    59 IKENKTGRYEDTFPWVSLCGIERNFLRCDDTPLVYTE---LDSTE--KELRIGQSTIYHSFQPSS 118

  Fly   141 LYMDPRNGRVYHPAAPQVGGIGLVRSKLAIELSQHFEFLAGEASPTHFQWNGERLELQ 198
            |.|: .:|||||..  .:||..||..||..:|.:.|.| ..:..|..||...:.:||:
 Worm   119 LSMN-SSGRVYHKC--PIGGKALVADKLTDKLYRRFRF-DDDGVPVGFQCGEQIIELK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30010NP_724847.2 DUF4505 29..201 CDD:464402 80/171 (47%)
F59C6.12NP_001021522.1 DUF4505 12..171 CDD:464402 78/168 (46%)

Return to query results.
Submit another query.