DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30008 and AT3G06460

DIOPT Version :10

Sequence 1:NP_724853.1 Gene:CG30008 / 246388 FlyBaseID:FBgn0050008 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_187297.1 Gene:AT3G06460 / 819823 AraportID:AT3G06460 Length:298 Species:Arabidopsis thaliana


Alignment Length:261 Identity:66/261 - (25%)
Similarity:107/261 - (40%) Gaps:64/261 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TIYKDPWYMITVLVLYL--YFVTKAGPHFMEWRKPYELKRLILLHNFIQVVSCIYAIKEVLYITD 79
            |:....:::..|:.|||  .|:.:.....:....|..||.:..:|:.|            |::..
plant    28 TLGSTVFFVFVVVSLYLSATFLLRYTVDSLPTLGPRILKPITAVHSLI------------LFLLS 80

  Fly    80 NTIYIFWKCRDIGSSPELVRRYYNLAY---------FLFWL------KISELIETVIFVLRKKQN 129
            .|:.:......|.||....|.:..:.:         ..||.      ||.|.::|::.:|.|...
plant    81 LTMAVGCTLSLISSSDPKARLFDAVCFPLDVKPKGPLFFWAQVFYLSKILEFVDTLLIILNKSIQ 145

  Fly   130 QVSKLHIFHHFSTVTLVYALINFNENGSAAYFCV--FLNSIVHVIMYSYYFVAAVADKTLVQALT 192
            ::|.||::||.:.|.|.|..:...:    :.|.|  .|||.||||||.|||:.|:..:      .
plant   146 RLSFLHVYHHATVVILCYLWLRTRQ----SMFPVGLVLNSTVHVIMYGYYFLCAIGSR------P 200

  Fly   193 PVKKCITVIQMTQFVLILTQVAFQLVL------------CGMPPLVLLY----FTTVILGMFYGF 241
            ..||.:|..||.||       ||.:.|            .|...:..:|    ||..:|.:||.|
plant   201 KWKKLVTNFQMVQF-------AFGMGLGAAWMLPEHYFGSGCAGIWTVYFNGVFTASLLALFYNF 258

  Fly   242 Y 242
            :
plant   259 H 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30008NP_724853.1 ELO 17..257 CDD:460083 66/261 (25%)
AT3G06460NP_187297.1 ELO 28..270 CDD:460083 66/261 (25%)

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