DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30008 and elovl1

DIOPT Version :10

Sequence 1:NP_724853.1 Gene:CG30008 / 246388 FlyBaseID:FBgn0050008 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001016644.1 Gene:elovl1 / 549398 XenbaseID:XB-GENE-1014374 Length:290 Species:Xenopus tropicalis


Alignment Length:249 Identity:82/249 - (32%)
Similarity:128/249 - (51%) Gaps:24/249 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IYKDPWYMITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHNFIQVVSCIYAIKEVL---YITD 79
            :.:.|:....:|:.|:|||...||..|..|||::||.|::::||..|....|.:.|.|   ::|.
 Frog    28 LMQSPFLPGAILLSYVYFVLSLGPRIMANRKPFDLKPLMVVYNFSLVALSAYIVYEFLMSGWLTG 92

  Fly    80 NTIYIFWKCR--DIGSSPELVRRYYNLAYFLFWLKISELIETVIFVLRKKQNQVSKLHIFHHFST 142
            .|    |:|.  |:..:| :..|...:|:...:.|..||::||.||:|||.:|::.||||||...
 Frog    93 YT----WRCDPVDVSDTP-MALRMVRVAWLFLFSKFIELLDTVFFVVRKKNSQITFLHIFHHSVL 152

  Fly   143 VTLVYALINFNENGSAAYFCVFLNSIVHVIMYSYYFVAAVADKTLVQALTPVKKCITVIQMTQFV 207
            ....:..:.|...|..: |...:||:||||||.||.::|...:  .|.....||.:|.||:.|||
 Frog   153 PWSWWWGVKFGPGGMGS-FHAMINSLVHVIMYFYYGLSAAGPR--FQKYLWWKKHMTAIQLIQFV 214

  Fly   208 LI---LTQVAFQLVLCGMPP----LVLLYFTTVILGMFYGFYDFYNSAYQASQR 254
            |:   ::|..|........|    |:.:|.|.    .|..|.:|:..||...:|
 Frog   215 LVSIHISQYYFMSSCDYQYPIFIHLIWIYGTV----FFILFSNFWYQAYTKGRR 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30008NP_724853.1 ELO 17..257 CDD:460083 82/249 (33%)
elovl1NP_001016644.1 ELO 27..267 CDD:460083 82/249 (33%)

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