DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30008 and CG6660

DIOPT Version :10

Sequence 1:NP_724853.1 Gene:CG30008 / 246388 FlyBaseID:FBgn0050008 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_651104.1 Gene:CG6660 / 42708 FlyBaseID:FBgn0039030 Length:272 Species:Drosophila melanogaster


Alignment Length:257 Identity:80/257 - (31%)
Similarity:129/257 - (50%) Gaps:42/257 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 WYMITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHNFIQVVSCIYAIKEVLYITDNTIYIF-- 85
            |.::.::.||:.||...||.:|..|.|:||||::.::|.:||            :.:.||::.  
  Fly    31 WIVLAIVALYVAFVLHYGPRWMANRAPFELKRVMQVYNVVQV------------LANATIFVIGL 83

  Fly    86 ----------WKCRDI---GSSPELVRRYYNLAYFLFWLKISELIETVIFVLRKKQNQVSKLHIF 137
                      |.|:.:   ..||.:::..| .:|..:.||..:|::||..|||||.:|||.||::
  Fly    84 SNTYLQPGYSWTCQPVDHTDRSPAMMKTLY-ASYAYYMLKYLDLLDTVFIVLRKKNSQVSFLHVY 147

  Fly   138 HHFSTVTLVYALINFNENGSAAYFCVFLNSIVHVIMYSYYFVAAVADKTLVQALTPVKKCITVIQ 202
            ||...|..|...:.| ..||.......:|.:||.:||:||:.|::.   .|:.|...|:.||.:|
  Fly   148 HHGGMVFGVSIFMTF-LGGSHCSMLGIINLLVHTVMYAYYYAASLG---AVKNLLWWKQRITQLQ 208

  Fly   203 MTQFVLILTQVAFQLVL----CGMPPLVLLYFTTVI--LGMFYGFYDFYNSAYQASQRRKSQ 258
            :.||..:...  |.||:    |..|  |.:.|...|  :.||..|:|||...|...||:.::
  Fly   209 LMQFGYLTFH--FLLVIVRNPCQFP--VFIAFIGFIQNIFMFSMFFDFYCKTYIRKQRKSAE 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30008NP_724853.1 ELO 17..257 CDD:460083 80/254 (31%)
CG6660NP_651104.1 ELO 25..265 CDD:460083 80/254 (31%)

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