DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30008 and CG9459

DIOPT Version :10

Sequence 1:NP_724853.1 Gene:CG30008 / 246388 FlyBaseID:FBgn0050008 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_649958.2 Gene:CG9459 / 41213 FlyBaseID:FBgn0037764 Length:265 Species:Drosophila melanogaster


Alignment Length:265 Identity:82/265 - (30%)
Similarity:133/265 - (50%) Gaps:26/265 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 INLQP--VVNVPTIYKDPWYMITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHNFIQVV-SCI 68
            :|..|  .|.:| :....|.::|:|.:||.|:...||.||:.:|||.|.|.|.::|.:|:. :.|
  Fly     9 LNRSPPDPVRLP-LTSSHWPVLTILGIYLVFIKIVGPWFMQNQKPYNLDRAIKIYNIVQIAYNVI 72

  Fly    69 YAIKEVLYITDNTIYIFWKCRDIGSSPELVRRYYN----LAYFLFWLKISELIETVIFVLRKKQN 129
            ..|..|.::.....|.| .|  |.:.| |...|.|    |:|..|:.|:.:|:|||.|:.|||..
  Fly    73 LLIFSVHFMLGPGNYNF-SC--ISNLP-LDHEYKNWERWLSYSYFFNKLMDLLETVFFIFRKKYR 133

  Fly   130 QVSKLHIFHHFSTVTLVYALINFNENGSAAYFCVFLNSIVHVIMYSYYFVAAV-----ADKTLVQ 189
            |:|.||:|||...|.:.:..:.:...|...:|.:..|.:||.:||:||:.:::     .|...  
  Fly   134 QISFLHVFHHVYMVYIGFLYMYYYGYGGHGFFLITFNVVVHTMMYTYYYQSSLNRNSGGDLWW-- 196

  Fly   190 ALTPVKKCITVIQMTQFVLILTQVAFQL--VLCGMPPLVLLYFTTVILGMFYGFYDFYNSAYQAS 252
                 ||.|||:|:.|||:|.:...:.|  ..|....|...:.:.:.:.....|.:||...|...
  Fly   197 -----KKYITVVQLVQFVIIFSHSVYILRQTDCQTSRLSATWGSLISVVFIILFSNFYVRTYILP 256

  Fly   253 QRRKS 257
            ::.||
  Fly   257 KKTKS 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30008NP_724853.1 ELO 17..257 CDD:460083 76/251 (30%)
CG9459NP_649958.2 ELO 20..261 CDD:460083 77/252 (31%)

Return to query results.
Submit another query.