DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30008 and CG16904

DIOPT Version :10

Sequence 1:NP_724853.1 Gene:CG30008 / 246388 FlyBaseID:FBgn0050008 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster


Alignment Length:254 Identity:67/254 - (26%)
Similarity:113/254 - (44%) Gaps:41/254 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHNFIQVVSCIYAIKEVLYITDNTIYIFWKCRD 90
            :.::.:||.||.|.|...|:..:..:|:.::..:|          |.:||:   |::...|    
  Fly    25 VIIITVYLLFVLKLGRKLMDKHEALQLRGVLKFYN----------IGQVLF---NSVIFVW---- 72

  Fly    91 IGSSPELVRRYYN-------------------LAYFLFWLKISELIETVIFVLRKKQNQVSKLHI 136
             |.....|::.||                   |:|.....|:.:|::|:.|||||||.|::.||:
  Fly    73 -GIHLLFVQKPYNLSCMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHV 136

  Fly   137 FHHFSTVTLVYALINFNENGSAAYFCVFLNSIVHVIMYSYYFVAAVADKTLVQALTPVKKCITVI 201
            |||...|...:.||.|...|...:.....|.:||::||.||:.::.:..  ||.....||.:|:.
  Fly   137 FHHVFMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQN--VQESLWWKKYLTLG 199

  Fly   202 QMTQFVLILTQVAFQLVL--CGMPPLVLLYFTTVILGMFYGFYDFYNSAYQASQRRKSQ 258
            |:.||:|:.....:....  |.....|:...::....||..|..||...|...:..||:
  Fly   200 QLVQFLLMFLHCMYTYFQPNCSASRGVIYVISSASAFMFLMFTKFYIKTYIRPKEVKSK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30008NP_724853.1 ELO 17..257 CDD:460083 65/251 (26%)
CG16904NP_649957.1 ELO 16..257 CDD:460083 65/251 (26%)

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