DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30008 and Elo68alpha

DIOPT Version :10

Sequence 1:NP_724853.1 Gene:CG30008 / 246388 FlyBaseID:FBgn0050008 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster


Alignment Length:261 Identity:74/261 - (28%)
Similarity:117/261 - (44%) Gaps:18/261 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASASINLQPVVNVP-------TIYKDPWYMITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHN 60
            ||..|:..|..:.|       .:....|.:..:|.:||..|..| |.:....||.:|:..:..|:
  Fly     2 ASLGISFHPFPDQPDERTRNWPLVDSFWTVPVLLSIYLLMVRYA-PKWTTRHKPLQLRAPLFCHS 65

  Fly    61 FIQVVSCIYAIKEVLYITDNTIYIF--WKCRDIGSSPELVRRYYNLAYFLFWL-KISELIETVIF 122
            ...|....|...|:...|.:..|.|  ..|| :...|..:|  ...|::.|:: ||.|..:|..|
  Fly    66 LAMVFLNGYICLELYAATRDLDYNFGCQPCR-VSFDPHEMR--LTKAFWWFYISKILEFADTAFF 127

  Fly   123 VLRKKQNQVSKLHIFHHFSTVTLVYALINFNENGSAAYFCVFLNSIVHVIMYSYYFVAAVADKTL 187
            :||:|.:|:|.||::||.:.....:.||.:...|| .|....:||.||:|||.||.::.:..:  
  Fly   128 ILRQKWSQLSFLHVYHHSTMFVFCWILIKWMPTGS-TYVPAMINSFVHIIMYGYYALSVLGPR-- 189

  Fly   188 VQALTPVKKCITVIQMTQFVLILTQVAFQLVL-CGMPPLVLLYFTTVILGMFYGFYDFYNSAYQA 251
            ||.....|:.:|.:|:.||.:|....:..||. |.....:.|......|...:.|..||...|..
  Fly   190 VQRFLWWKRYLTGLQLVQFTIIFFWASQMLVRGCEYGTWITLSMAIYSLPFLFMFGKFYMQKYTV 254

  Fly   252 S 252
            |
  Fly   255 S 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30008NP_724853.1 ELO 17..257 CDD:460083 69/240 (29%)
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 69/240 (29%)

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