DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30008 and elo-1

DIOPT Version :10

Sequence 1:NP_724853.1 Gene:CG30008 / 246388 FlyBaseID:FBgn0050008 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_501689.1 Gene:elo-1 / 177787 WormBaseID:WBGene00001239 Length:288 Species:Caenorhabditis elegans


Alignment Length:269 Identity:69/269 - (25%)
Similarity:118/269 - (43%) Gaps:64/269 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ITVLVLYLYFVTKAGPH-FMEWRKPYELKRLILLHNFIQVVSCIYAIKEVLYITD---NTIYIFW 86
            :|:....||.|...|.. ||..|:|::|...:.:.|||...   ::|...:.:|.   .||    
 Worm    46 VTIQASILYMVVVFGTKWFMRNRQPFQLTIPLNIWNFILAA---FSIAGAVKMTPEFFGTI---- 103

  Fly    87 KCRDIGSSPELVRRYYNLAYFL-----FWL------KISELIETVIFVLRKKQNQVSKLHIFHHF 140
                  ::..:|..|..:..|.     :|:      |:.||::|:..||||:  .:..||.:||.
 Worm   104 ------ANKGIVASYCKVFDFTKGENGYWVWLFMASKLFELVDTIFLVLRKR--PLMFLHWYHHI 160

  Fly   141 STVTLVYALIN------FNENGSAAYFCVFLNSIVHVIMYSYYFVAAVADKTLVQALTPVKKCIT 199
              :|::||..:      ||..|      ::||.:||..||||||:.::  |..|...  :.:.||
 Worm   161 --LTMIYAWYSHPLTPGFNRYG------IYLNFVVHAFMYSYYFLRSM--KIRVPGF--IAQAIT 213

  Fly   200 VIQMTQFVLILTQVA-------FQLVLCGMPPLVL---LYFTTVILGMFYGFY-DFY-----NSA 248
            .:|:.||::....:|       |....|...|.|.   ::..|..|.:|..|: ..|     ...
 Worm   214 SLQIVQFIISCAVLAHLGYLMHFTNANCDFEPSVFKLAVFMDTTYLALFVNFFLQSYVLRGGKDK 278

  Fly   249 YQASQRRKS 257
            |:|..::|:
 Worm   279 YKAVPKKKN 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30008NP_724853.1 ELO 17..257 CDD:460083 68/267 (25%)
elo-1NP_501689.1 ELO 39..278 CDD:460083 66/258 (26%)

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