DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT2 and VARS1

DIOPT Version :9

Sequence 1:NP_724816.3 Gene:GstT2 / 246386 FlyBaseID:FBgn0050005 Length:228 Species:Drosophila melanogaster
Sequence 2:XP_005249419.1 Gene:VARS1 / 7407 HGNCID:12651 Length:1265 Species:Homo sapiens


Alignment Length:149 Identity:31/149 - (20%)
Similarity:53/149 - (35%) Gaps:50/149 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PIRFYYDLLSPIARGLWIGLKFSNSPVEYCPIALRKFEQLTDEYKKINRFQKVPAIVGGDFHLSE 68
            |.|:   :|.|.||.:|      |:...:....:|:.|           |:.|         |.|
Human   171 PFRY---VLDPPARRIW------NNVTRWFVTCVRQPE-----------FRAV---------LGE 206

  Fly    69 TIAI--IRYLADKGQFDEKLYPKT-------LENRARVDEFLEWQHLNIRLACSMYFRDAWLFPM 124
            .:..  .|.|:.:...:....|||       .:.|.::::|.:.|.:..:.            |.
Human   207 VVLYSGARPLSHQPGPEAPALPKTAAQLKKEAKKREKLEKFQQKQKIQQQQ------------PP 259

  Fly   125 NGIAPKPKPEQIQALIEGV 143
            .|...|||||:.:....||
Human   260 PGEQKKPKPEKREKRDPGV 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT2NP_724816.3 GST_N_Theta 5..80 CDD:239348 15/76 (20%)
GstA 7..202 CDD:223698 29/146 (20%)
GST_C_family 93..218 CDD:295467 12/51 (24%)
VARS1XP_005249419.1 GstA <56..203 CDD:223698 11/51 (22%)
GST_C_ValRS_N 92..213 CDD:198327 14/70 (20%)
PTZ00419 283..1265 CDD:240411
ValRS_core 336..939 CDD:185677
tRNA-synt_1_2 514..>610 CDD:290334
Anticodon_Ia_Val 939..1076 CDD:153416
Val_tRNA-synt_C 1197..1259 CDD:287436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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