DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT2 and eef1e1

DIOPT Version :9

Sequence 1:NP_724816.3 Gene:GstT2 / 246386 FlyBaseID:FBgn0050005 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001373479.1 Gene:eef1e1 / 565440 ZFINID:ZDB-GENE-030131-4949 Length:173 Species:Danio rerio


Alignment Length:179 Identity:40/179 - (22%)
Similarity:77/179 - (43%) Gaps:42/179 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IALRKFEQLTDEY---KKINRF-----QKVPAIVGGDF-HLSETIAIIRYLADKGQFDEKLYPKT 90
            :|||:...| :.:   ||.|::     :|||.:...:. .|:..:.|..:|..:.:..| |....
Zfish     1 MALRELNSL-ERFLGLKKANKYSTQGGKKVPVLQNNNGPALTGLVTIACHLVKEAKRPE-LLGDD 63

  Fly    91 LENRARVDEFLEWQHLNIRL-ACSMYFRDAWLFPMNGIAPKPKPEQIQALIEGVENNLGLLERLW 154
            .|.||.|.::||  |...:| .||                   .|:::.:::.       |.|..
Zfish    64 AEQRAVVQQWLE--HRITKLDNCS-------------------KEEVKVILKD-------LNRYL 100

  Fly   155 LENDFLVGKNLTMADILGSSEINQLRLCQYRVDEKK-FPKVVKWLERVR 202
            .:..:|.|...|:||||....|:.: :.:..:.||: :..|.:|.:.::
Zfish   101 EDKVYLAGNVFTLADILMYYGIHHI-IVELAIQEKECYLNVSRWFDHIQ 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT2NP_724816.3 GST_N_Theta 5..80 CDD:239348 13/53 (25%)
GstA 7..202 CDD:223698 40/177 (23%)
GST_C_family 93..218 CDD:295467 24/112 (21%)
eef1e1NP_001373479.1 GST_C_AIMP3 64..161 CDD:198338 25/114 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.