DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT2 and gdap1

DIOPT Version :10

Sequence 1:NP_724816.3 Gene:GstT2 / 246386 FlyBaseID:FBgn0050005 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001018511.1 Gene:gdap1 / 553702 ZFINID:ZDB-GENE-050522-424 Length:362 Species:Danio rerio


Alignment Length:186 Identity:39/186 - (20%)
Similarity:74/186 - (39%) Gaps:32/186 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 YKKINRFQKVPAIVGGDFHLSETIAIIRYLADKGQFDEKLYPKTLENRA-----RVDEFLEWQHL 106
            :.::|...:||.:|..:..:.:...|:.||  :..|.::..||.:....     ||..:.|   |
Zfish    82 FMRLNPTGEVPVLVHDNHVICDPTQIMDYL--E
QNFCDEQTPKLIPEEGSTYYHRVQHYRE---L 141

  Fly   107 NIRLACSMYFRDAWLFP---MNGIAPKPKPEQIQALIEGVENNLGLLERLWLENDFLVGKNLTMA 168
            ...|....|.....|.|   ::...|......|:..|...|:.   |::|.:||..|  |:..:|
Zfish   142 LDSLQMDAYTHGCILHPEITVDSHIPAYATTHIRTQIGNTESE---LKKLAVENPDL--KDAYIA 201

  Fly   169 DILGSSEINQLRLCQYRVDEKKFP-KVVKWLERVRVSANPYHDEGLTFIDRKSKQS 223
            .             |.|:..|.|. ..:|:|:::........|:..|.:.|:|:::
Zfish   202 K-------------QRRLKSKLFDHDNMKYLKKLLDELENVLDQVETELQRRSEET 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT2NP_724816.3 GST_N_Theta 5..80 CDD:239348 7/32 (22%)
GST_C_family 93..218 CDD:470672 27/133 (20%)
gdap1NP_001018511.1 GST_N_GDAP1 40..112 CDD:239350 7/31 (23%)
GST_C_family 193..304 CDD:470672 13/67 (19%)

Return to query results.
Submit another query.