DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT2 and vars1

DIOPT Version :10

Sequence 1:NP_724816.3 Gene:GstT2 / 246386 FlyBaseID:FBgn0050005 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001298275.1 Gene:vars1 / 114427 ZFINID:ZDB-GENE-010601-1 Length:1271 Species:Danio rerio


Alignment Length:213 Identity:52/213 - (24%)
Similarity:81/213 - (38%) Gaps:69/213 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YYDLLSPIARGLWIGLKFSNSPVEYCPIALRKFEQLTDEYKKINRFQKVPAIV---GGDFHLSET 69
            :..||..||.|             :||...|...|  |...::.|.:  ||:|   .|...||.|
Zfish    13 FRSLLPLIAAG-------------FCPSPPRILHQ--DPPAELARSR--PALVLAGAGGTVLSGT 60

  Fly    70 IAIIRYLADKGQFDEKLYPKTLENRARVDEFLE---WQHLNIR------LACSMYFRDAWLFPMN 125
            .|:..|||..|:            ||..|:..|   ||.|:..      :||::      .||:.
Zfish    61 SAVSWYLAATGK------------RAGSDKKQESQVWQWLSFAENELTPVACAV------AFPLL 107

  Fly   126 GIAPKPKPEQ------IQALIEGVENNLGLLERLWLENDFLVGKNLTMADILGSSEINQLRLCQY 184
            ||....|..|      :..:::.::..|.|       ..||||:::|:||    :.:....|..:
Zfish   108 GIMGVDKKLQQSSRAELLRVLKALDGTLAL-------RTFLVGESVTLAD----AAVAMAALLPF 161

  Fly   185 R-----VDEKKFPKVVKW 197
            :     .|.|....|.:|
Zfish   162 KYALEPADRKSLVNVTRW 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT2NP_724816.3 GST_N_Theta 5..80 CDD:239348 22/74 (30%)
GST_C_family 93..218 CDD:470672 29/125 (23%)
vars1NP_001298275.1 GST_C_ValRS_N 80..202 CDD:198327 26/117 (22%)
PTZ00419 291..1270 CDD:240411
Blue background indicates that the domain is not in the aligned region.

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