DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30002 and CG11842

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:239 Identity:77/239 - (32%)
Similarity:120/239 - (50%) Gaps:44/239 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 CGGSLISELFVLTAAHCFKMCPRSKEIRVWLGELDLSSTSDCTTYNYERVCAPPVEEFTIDKWIL 154
            |||:|||:..||||||| ...|:.......||:|:..:.:|         .|.| |:|.:..:..
  Fly   103 CGGTLISDRHVLTAAHC-HYSPQGSVNIARLGDLEFDTNND---------DADP-EDFDVKDFTA 156

  Fly   155 HEEFNLFYPGY--DIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQRFMAVGWGKTESL-R 216
            |.||:  ||..  ||::::|::.|.|.|:..|.|||..|.      :||..|:|:|||:.|.: |
  Fly   157 HPEFS--YPAIYNDISVVRLSRPVTFNDYKHPACLPFDDG------RLGTSFIAIGWGQLEIVPR 213

  Fly   217 YANSTME-VDI------------RTEKCTDGRD-TSFLC-ASGDYVDTCNGDSGGPLLWKTTLFG 266
            ..|..:: |.:            |.::..:|.: |:.|| .|.::.||||||||||:|    ::.
  Fly   214 TENKKLQKVKLYNYGTRCRITADRNDELPEGYNATTQLCIGSNEHKDTCNGDSGGPVL----IYH 274

  Fly   267 KDRAVQF---GVVSTGSQNCGAGHKAYYMDVPTYMPWILEKMAE 307
            .|....:   |:.|.|.........|.|..|..|:.||.:::|:
  Fly   275 MDYPCMYHVMGITSIGVACDTPDLPAMYTRVHFYLDWIKQQLAK 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 74/231 (32%)
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 76/234 (32%)

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