DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and CG11670

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001368950.1 Gene:CG11670 / 41608 FlyBaseID:FBgn0038114 Length:431 Species:Drosophila melanogaster


Alignment Length:246 Identity:75/246 - (30%)
Similarity:106/246 - (43%) Gaps:61/246 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 RCGGSLISELFVLTAAHCFKMCPRSKEIRVWLGELDLSSTSDCTTYNYERVCAPPVEEFTIDKWI 153
            :||||||||.||||||||......|.:| |.:|::.|.        .:|...||  :...:.:..
  Fly   199 KCGGSLISEEFVLTAAHCLTTHGTSPDI-VKIGDIKLK--------EWELNVAP--QRRRVAQIY 252

  Fly   154 LHEEFNLFYPGYDIALIKLNKKVVFKDHIRPICL-PLTDELLAFTLQLGQRFMAVGWGKTESLRY 217
            ||..:|.....:||.||:||:.|.:...:||:.| |:.|               :.:||..::.|
  Fly   253 LHPLYNASLNYHDIGLIQLNRPVEYTWFVRPVRLWPMND---------------IPYGKLHTMGY 302

  Fly   218 ---------ANSTMEVDIRT---EKCTD----------GRDTSFLCASGDYV---DTCNGDSGGP 257
                     .|...|:|:..   |:|..          |..||.:||. ||.   |||.||||||
  Fly   303 GSTGFAQPQTNILTELDLSVVPIEQCNSSLPADEGSPHGLLTSQICAH-DYEKNRDTCQGDSGGP 366

  Fly   258 LLW-------KTTLFGKDRAVQFGVVSTGSQNCGAGHKAYYMDVPTYMPWI 301
            |..       :.|.....|....|:.|.|:. |.:.....|..|.:|:.||
  Fly   367 LQLNLERRRRRHTSRKHYRYYLVGITSYGAY-CRSELPGVYTRVSSYIDWI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 73/244 (30%)
CG11670NP_001368950.1 Tryp_SPc 172..419 CDD:238113 75/246 (30%)

Return to query results.
Submit another query.