DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30002 and snk

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:283 Identity:85/283 - (30%)
Similarity:128/283 - (45%) Gaps:60/283 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 IPAVRIRFMITGGRKSSLMSQPWMAFLHIA-------SDLEMCRCGGSLISELFVLTAAHCFKMC 110
            :|:|.   :|.||..:.....|.||.|...       .|::. .|||:|:|||:|||||||....
  Fly   180 VPSVP---LIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKW-GCGGALVSELYVLTAAHCATSG 240

  Fly   111 PRSKEIRVWLGELDLSSTSDCTTYNYERVCAPPVEEFTIDKWILHEEF--NLFYPGYDIALIKLN 173
            .:..:: |.||...|:.||            ...::..|...:||.::  :.:|  :||||:||.
  Fly   241 SKPPDM-VRLGARQLNETS------------ATQQDIKILIIVLHPKYRSSAYY--HDIALLKLT 290

  Fly   174 KKVVFKDHIRPICLPLTDELLAFTLQLGQRFMAVGWGKTESL-RYANSTMEVDI----------- 226
            ::|.|.:.:||.||....||...|:      :|.|||:||.| ..:|:..:||:           
  Fly   291 RRVKFSEQVRPACLWQLPELQIPTV------VAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQI 349

  Fly   227 --RTEKCTDGRDTSFLCASGDYV----DTCNGDSGGPLLWKTTLFGKDRAVQF--GVVSTGSQNC 283
              :..:...|......||.  |:    |||.||||||:   ..|..:...|.|  |:.|.|....
  Fly   350 YRKERRLPRGIIEGQFCAG--YLPGGRDTCQGDSGGPI---HALLPEYNCVAFVVGITSFGKFCA 409

  Fly   284 GAGHKAYYMDVPTYMPWILEKMA 306
            .......|..:.:|:.|| ||:|
  Fly   410 APNAPGVYTRLYSYLDWI-EKIA 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 78/267 (29%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 81/271 (30%)
Blue background indicates that the domain is not in the aligned region.

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