DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and Sp7

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_649734.2 Gene:Sp7 / 40918 FlyBaseID:FBgn0037515 Length:391 Species:Drosophila melanogaster


Alignment Length:305 Identity:94/305 - (30%)
Similarity:146/305 - (47%) Gaps:57/305 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EAGMEDWTPGQRLVYENLTQQDCGVR--SNQIPAVRIRFMITGGRKSSLMSQPWMAFLHIASD-- 84
            :||:.:..|         :...||..  ||:         :..|..:::....|||.|....:  
  Fly   115 QAGLGNLLP---------SPPKCGPHSFSNK---------VYNGNDTAIDEFNWMALLEYVDNRG 161

  Fly    85 LEMCRCGGSLISELFVLTAAHCFKMCPRSKE---IRVWLGELDLSSTSDCTTYNYERVCAPPVEE 146
            .....||||||:..:|||||||......::.   ..|.|||.|.|...||    .:.:|..|:.:
  Fly   162 RRELSCGGSLINNRYVLTAAHCVIGAVETEVGHLTTVRLGEYDTSKDVDC----IDDICNQPILQ 222

  Fly   147 FTIDKWILHEEFNLFYPG-----YDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQRFMA 206
            ..|::..:|.:::   |.     :||||::|::.||..::|:|:||||....:|  :..|:..:.
  Fly   223 LGIEQATVHPQYD---PANKNRIHDIALLRLDRPVVLNEYIQPVCLPLVSTRMA--INTGELLVV 282

  Fly   207 VGWGKTESLRYANSTMEVDIRT---EKCTDGRDT-------SFLCASGD-YVDTCNGDSGGPLLW 260
            .|||:|.:.|.:.....:|:..   :.|.....|       |.||..|: |.|:|:|||||||:.
  Fly   283 SGWGRTTTARKSTIKQRLDLPVNDHDYCARKFATRNIHLISSQLCVGGEFYRDSCDGDSGGPLMR 347

  Fly   261 KTTLFGKDRA-VQFGVVSTGSQNCG-AGHKAYYMDVPTYMPWILE 303
            :    |.|:| .|.||||.|:: || .|....|..|..||.||:|
  Fly   348 R----GFDQAWYQEGVVSFGNR-CGLEGWPGVYTRVADYMDWIVE 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 84/261 (32%)
Sp7NP_649734.2 CLIP 31..84 CDD:463440
Tryp_SPc 137..388 CDD:238113 87/265 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.