DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30002 and mas

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_523919.1 Gene:mas / 38499 FlyBaseID:FBgn0011653 Length:1047 Species:Drosophila melanogaster


Alignment Length:294 Identity:79/294 - (26%)
Similarity:120/294 - (40%) Gaps:60/294 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LVYENLTQQDC--GVRSNQIPAVRIRFMITGGRKSSLMSQPWMAFLHIASDLEMCRCGGSLISEL 98
            |||....||..  |::||.  :.|.|..:.||....  :..|...:.:.:.|....||.:||...
  Fly   777 LVYPEYYQQRSLYGLQSNF--SGRRRARVVGGEDGE--NGEWCWQVALINSLNQYLCGAALIGTQ 837

  Fly    99 FVLTAAHCFKMCPRSKE-IRVWLGELDLSSTSDCTTYNYERVCAPPVEEFTIDKWILHEEFNLFY 162
            :|||||||.....||.: |.|.:|:.||:          .:..:|..:...:....:|...|...
  Fly   838 WVLTAAHCVTNIVRSGDAIYVRVGDYDLT----------RKYGSPGAQTLRVATTYIHHNHNSQT 892

  Fly   163 PGYDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQRFMAVGWG----------------- 210
            ...||||:||:.:...:|.:..:|||..    ..:...|:|....|:|                 
  Fly   893 LDNDIALLKLHGQAELRDGVCLVCLPAR----GVSHAAGKRCTVTGYGYMGEAGPIPLRVREAEI 953

  Fly   211 ----KTESLRYANSTMEVDIRTEKCTDGRDTSFLCASGDY-VDTCNGDSGGPLLWKTTLFGKDRA 270
                .||.:|..|:.      |||......:|| ||.|:. .|.|.||.||||:.:...|.:   
  Fly   954 PIVSDTECIRKVNAV------TEKIFILPASSF-CAGGEEGHDACQGDGGGPLVCQDDGFYE--- 1008

  Fly   271 VQFGVVSTGSQNCGAGHK---AYYMDVPTYMPWI 301
             ..|:||.|   .|.|.:   ..|:...:::.||
  Fly  1009 -LAGLVSWG---FGCGRQDVPGVYVKTSSFIGWI 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 67/264 (25%)
masNP_523919.1 CLIP_SPH_mas 55..87 CDD:465746
CLIP_SPH_mas 192..224 CDD:465746
CLIP_SPH_mas 343..374 CDD:465746
CLIP_SPH_mas 457..492 CDD:465746
CLIP_SPH_mas 532..567 CDD:465746
Tryp_SPc 803..1041 CDD:238113 69/266 (26%)
Blue background indicates that the domain is not in the aligned region.

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