DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and CG14760

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_610366.1 Gene:CG14760 / 35802 FlyBaseID:FBgn0033277 Length:529 Species:Drosophila melanogaster


Alignment Length:288 Identity:84/288 - (29%)
Similarity:124/288 - (43%) Gaps:61/288 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 GGRKSSLMS--QP-----WMAFLHIASDLE--------------------MCRCGGSLISELFVL 101
            |||.|.|:.  ||     |.....|||...                    ...||.::|...::|
  Fly   251 GGRFSCLVEAFQPTCSCGWSRIPRIASPTNEEAVLHEFPPMAGVLTKKHGKVFCGAAIIHHRYLL 315

  Fly   102 TAAHCFKMCPRSK---EIRVWLGELDLSSTSDCTTYNYERVCAPPVEEFTIDKWILHEEFNLF-- 161
            :||||| :.|.:.   ::||.:||.||:|:.:  |:..:|        :.:|..||||:|:..  
  Fly   316 SAAHCF-LGPETNSAAKLRVVVGEHDLASSFE--TFATQR--------YDLDALILHEDFSQASG 369

  Fly   162 YPGYDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQL-GQRFMAVGWGKT-----ESLRYANS 220
            .|..|||::|....:|:..|:.|.||||........|.| |.:.:|.|||.|     ::.|...:
  Fly   370 QPKNDIAMLKTRMAIVWSQHVGPACLPLQPGEDGQKLPLAGHQVVAAGWGTTSYGGPQTHRLLKA 434

  Fly   221 TMEVDIRTEKC------TDGRDTSFLCASGDYVDTCNGDSGGPLLWKTTLFGKDRAVQFGVVSTG 279
            |::| |...:|      ..|......|......|||..||||.|..:.    ..|.:..|:||.|
  Fly   435 TLDV-IDGRRCRQALSSAGGLPPHTFCTYTPGRDTCQYDSGGALYERI----NGRLMAVGIVSFG 494

  Fly   280 SQNCGAGHKAYYMDVPTYMPWILEKMAE 307
             |.|.|...:....|.:::.||..|..|
  Fly   495 -QACAAQQPSVNTRVASFIKWIRTKSPE 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 80/280 (29%)
CG14760NP_610366.1 CUB 37..126 CDD:412131
Tryp_SPc 281..516 CDD:238113 70/251 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.