DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and gd

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster


Alignment Length:296 Identity:78/296 - (26%)
Similarity:120/296 - (40%) Gaps:82/296 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ITGGRKSSLMSQPWMAFLHI--ASDLEMCRCGGSLISELFVLTAAHCFKMCPR---SKEIRVWLG 121
            ||.|      |.||:|.:::  .:.|:. :|||||:|...|:::|||||:..:   |.|:.|:||
  Fly   257 ITRG------SWPWLAAIYVNNLTSLDF-QCGGSLVSARVVISSAHCFKLFNKRYTSNEVLVFLG 314

  Fly   122 ELDLSSTSDCTTYNYERVCAPPVEEFTIDKWILHEEFNLFYPGY--DIALIKLNKKVVFKDHIRP 184
            ..:|.:      :|.|...|.||     |...:|.:||.....|  |||:|.|..:|.|...|||
  Fly   315 RHNLKN------WNEEGSLAAPV-----DGIYIHPDFNSQLSSYDADIAVIILKDEVRFNTFIRP 368

  Fly   185 ICL----PLTDELLAFTLQLGQRFMAVGWGKTESLRYANSTMEVDIRTEKCTD------------ 233
            .||    ..|:.:      :|:|.:.:||....:.|..:..:..::..:|.||            
  Fly   369 ACLWSGSSKTEYI------VGERGIVIGWSFDRTNRTRDQKLSSELPGKKSTDASAPKVVKAPIV 427

  Fly   234 GRDTSF--------------LCA-----------SGDYVDTCNGDSGGPLL------W--KTTLF 265
            |....|              .||           ||..:.|  |.||..|.      |  :.|:.
  Fly   428 GNAECFRANAHFRSLSSNRTFCAGIQAEERDTHQSGASIYT--GISGAGLFIRRNNRWMLRGTVS 490

  Fly   266 GKDRAVQFGVVSTGSQNCGAGHKAYYMDVPTYMPWI 301
            ....||:.....:..:.|.......|.||..::.||
  Fly   491 AALPAVETPDAESSHKLCCKNQYIIYADVAKFLDWI 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 76/294 (26%)
gdNP_001259479.1 GD_N 27..124 CDD:464985
Tryp_SPc 257..526 CDD:238113 76/294 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.