DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and CG32260

DIOPT Version :9

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster


Alignment Length:337 Identity:94/337 - (27%)
Similarity:135/337 - (40%) Gaps:68/337 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SPLAITALVWGILCLTCPPLSEAGMEDW------TPGQRLVYENLTQQDCGVRSNQIPAVRIRFM 61
            |||:..:....::....||||:.....:      .|......|:.|....|..||:         
  Fly   272 SPLSGGSTATPMVFQPTPPLSQVVSPSFYPPPPPPPPNNAPRESATCGISGATSNR--------- 327

  Fly    62 ITGGRKSSLMSQPWMAFLHIASD-----LEMCRCGGSLISELFVLTAAHCFKMCPRSKEIRVWLG 121
            :.||.::...:.||:|.|....:     |:.. ||||||...:|:|:|||..  |....:|  ||
  Fly   328 VVGGMEARKGAYPWIAALGYFEENNRNALKFL-CGGSLIHSRYVITSAHCIN--PMLTLVR--LG 387

  Fly   122 ELDLSSTSDCTTYNYERVCAPPVEEFTID----KWILHEEFNLFYPGYDIALIKLNKKVVFKDHI 182
            ..|||.               |.|...:|    :.::||.|:|.....|||||:||.......:|
  Fly   388 AHDLSQ---------------PAESGAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGALPGNI 437

  Fly   183 RPICLPLTDELLAFTLQ--LGQRFMAVGWGKTESLRYANSTMEV-------DIRTEKCTDGRDTS 238
            .|||||   |...|..|  :|......|||   ::::...|.:|       .:....|.....:.
  Fly   438 SPICLP---EAAKFMQQDFVGMNPFVAGWG---AVKHQGVTSQVLRDAQVPIVSRHSCEQSYKSI 496

  Fly   239 F---------LCASGDYVDTCNGDSGGPLLWKTTLFGKDRAVQFGVVSTGSQNCGAGHKAYYMDV 294
            |         |||....||.|.|||||||:.........|....|:||.|.:.........|..|
  Fly   497 FQFVQFSDKVLCAGSSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARPNFPGVYTRV 561

  Fly   295 PTYMPWILEKMA 306
            .:|:|||.:.:|
  Fly   562 ASYVPWIKKHIA 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:214473 78/265 (29%)
Tryp_SPc 62..301 CDD:238113 78/265 (29%)
CG32260NP_728942.1 CLIP 194..244 CDD:288855
Tryp_SPc 327..568 CDD:214473 78/275 (28%)
Tryp_SPc 328..571 CDD:238113 80/268 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456137
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.