DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30002 and Mcpt1

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_742041.1 Gene:Mcpt1 / 29266 RGDID:621058 Length:247 Species:Rattus norvegicus


Alignment Length:253 Identity:84/253 - (33%)
Similarity:114/253 - (45%) Gaps:47/253 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ITGGRKSSLMSQPWMAFLHIASDLEM-CRCGGSLISELFVLTAAHCFKMCPRSKEIRVWLGELDL 125
            |.||.:|...|:|:||.|.|.::..: ..|||.|||..||||||||     :.:||.|.||..|:
  Rat    21 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHC-----KGREITVILGAHDV 80

  Fly   126 ---SSTSDCTTYNYERVCAPPVEEFTIDKWILHEEFNLFYPGYDIALIKLNKKVVFKDHIRPICL 187
               .||.               ::..::|.|:||.:|.....:||.|:||.|||.....:..:.|
  Rat    81 RKRESTQ---------------QKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPL 130

  Fly   188 PLTDELLAFTLQLGQRFMAVGWGKT---ESLRYANSTMEVDIRTEK-CTDGRDTSF---LCASGD 245
            |...:.    :..|....|.|||||   :...|....:|:.|..|| |.|.|...:   :|....
  Rat   131 PSPSDF----IHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRYYEYKFQVCVGSP 191

  Fly   246 YV--DTCNGDSGGPLLWKTTLFGKDRAVQFGVVSTGSQNCGAGHKAYYMDVPTYMPWI 301
            ..  ....||||||||.        ..|..|:||.|..:  |...|.:..|.||:|||
  Rat   192 TTLRAAFMGDSGGPLLC--------AGVAHGIVSYGHPD--AKPPAIFTRVSTYVPWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 82/251 (33%)
Mcpt1NP_742041.1 Tryp_SPc 21..242 CDD:238113 84/253 (33%)

Return to query results.
Submit another query.