DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30002 and CG18420

DIOPT Version :9

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:299 Identity:88/299 - (29%)
Similarity:132/299 - (44%) Gaps:57/299 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ILCLTCPPLSEAGMEDWTPGQRLVYENLTQQDCGVRSNQIPAVRIRFMITGGRKSSLMSQPWMAF 78
            :|.||..||             |........:||.||    .:::...|..|:.:...|.|||||
  Fly    12 LLLLTVFPL-------------LGSTQFLDSECGTRS----PLKLGPRIVNGKVAVRNSSPWMAF 59

  Fly    79 LHIASDLEMCRCGGSLISELFVLTAAHCFKMCPRSKEIRVWLGELDLSSTSDCTTYNYERVCAPP 143
            ||.:|:..:  |||:|||...||||||||  .|.: .|.|.|||             |.|.....
  Fly    60 LHTSSNQFI--CGGTLISRRLVLTAAHCF--IPNT-TIVVRLGE-------------YNRKLKGY 106

  Fly   144 VEEFTIDKWILHEEFNLFYPGYDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQRFMAVG 208
            .||..:::...|..::......||||::|...||:|.:|||||: :.|......:...:.....|
  Fly   107 REEHQVNRTFQHRFYDPNTHANDIALLRLVSNVVYKANIRPICI-MWDASWKHHIDSIKVLTGTG 170

  Fly   209 WGKTESLRYANSTMEVDIRTEKCTDGRDTSFLCASGDYV-----------DTCNGDSGGPLLWKT 262
            ||:|||:..::....:||       .|..|.:||.|..:           :.|.||:|||:....
  Fly   171 WGRTESMHDSSELRTLDI-------SRQPSKMCAFGSVLSNQFCAGNWNSNLCIGDTGGPVGAMV 228

  Fly   263 TLFGKDRAVQFGVVSTGSQNCGAGHKAYYMDVPTYMPWI 301
            ......|.||.|:..| ::.|  ...:.:.||.:::.:|
  Fly   229 RYRNAFRFVQVGIAIT-NKRC--QRPSVFTDVMSHIEFI 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:214473 77/249 (31%)
Tryp_SPc 62..301 CDD:238113 77/249 (31%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 77/250 (31%)
Tryp_SPc 43..267 CDD:238113 78/251 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BQ4K
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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