DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30002 and CG30375

DIOPT Version :10

Sequence 1:NP_001163100.1 Gene:CG30002 / 246384 FlyBaseID:FBgn0260474 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_724665.1 Gene:CG30375 / 246575 FlyBaseID:FBgn0050375 Length:398 Species:Drosophila melanogaster


Alignment Length:244 Identity:71/244 - (29%)
Similarity:112/244 - (45%) Gaps:47/244 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ITGGRKSSLMSQPWMAFLH-IASDLEMCRCGGSLISELFVLTAAHCFKMCPRSKEIRVWLGELDL 125
            |..|.::.....|.|..|. ::|:|.:. ||||::||.:::|||||....|.:..:...:||.||
  Fly   152 IANGVEAGKHEFPSMVGLRDLSSNLPIF-CGGSIVSERYIMTAAHCTARQPVASRLLALVGEHDL 215

  Fly   126 SSTSDCTTYNYERVCAPPVEEFTIDKWILHEEFNLFYPGY---------DIALIKLNKKVVFKDH 181
            |:.:: :.|         ..::.|...|.|       |||         ||||::....:.:...
  Fly   216 STGAE-SIY---------AAQYRIQNIINH-------PGYMETASGNINDIALLQTATPIEWSRG 263

  Fly   182 IRPICLPLTDELLAFTLQLGQRFMAVGWG-------KTESLRYAN-STMEVDIRTEKCTDGRDTS 238
            :.|||||:.....:|..   |....:|||       |:.:|:.|. .||:..:...:.......|
  Fly   264 VAPICLPIRQAENSFNY---QNVDIMGWGTLGFAASKSNTLQKATLLTMDNAVCRSRFNSSITPS 325

  Fly   239 FLC---ASGDYVDTCNGDSGGPLLWKTTLFGKDRAVQFGVVSTGSQNCG 284
            .||   |.|...|:|..|||||::    |..::|..|.||:|.| :.||
  Fly   326 HLCTYDAGGRGQDSCQYDSGGPVI----LRQRERMFQLGVISYG-RACG 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30002NP_001163100.1 Tryp_SPc 62..301 CDD:238113 71/244 (29%)
CG30375NP_724665.1 CUB 38..>100 CDD:412131
Tryp_SPc 152..387 CDD:238113 71/244 (29%)
Blue background indicates that the domain is not in the aligned region.

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